Job Description P45759 Confidence 100.00% Date Wed Jan 25 15:20:55 GMT 2012 Rank 1 Aligned Residues 378 % Identity 62% Template d1p9ra_ SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Resolution 2.50

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	L	N	E	D	S	A	A	P	V	I	R	L	I	N	A	I	L	S	E	A	I	K	E	T	A	S	D	I	H	I	E	T	Y	E	K	T	M	S	I	R	F	R	I	D	G	V	L	R	T	I	L	Q	P	N	K	K	L	A	A	L	L	I	S	R	I	K	V	M	A	R	L	D	I	A	E	K	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	F	S	L	A	E	E	A	P	I	I	K	L	I	N	A	X	L	G	E	A	I	K	E	G	A	S	D	I	H	I	E	T	F	E	K	T	L	S	I	R	F	R	V	D	G	V	L	R	E	V	L	A	P	S	R	K	L	S	S	L	L	V	S	R	V	K	V	X	A	K	L	D	I	A	E	K	R	V
Template Known Secondary structure																											T		S								T	T									T	T										G	G	G												T	T			T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	D	G	R	I	S	L	R	I	G	R	R	N	I	D	V	R	V	S	T	L	P	S	I	Y	G	E	R	A	V	L	R	L	L	D	K	N	S	L	Q	L	S	L	N	N	L	G	M	T	A	A	D	K	Q	D	L	E	N	L	I	Q	L	P	H	G	I	I	L	V	T	G	P	T	G	S	G	K	S	T
Query Conservation
Alig confidence											.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		P	Q	D	G	R	I	S	L	A	.	.	.	.	.	V	D	V	R	V	S	T	X	P	S	S	H	G	E	R	V	V	X	R	L	L	D	K	N	A	T	R	L	D	L	H	S	L	G	X	T	A	H	N	H	D	N	F	R	R	L	I	K	R	P	H	G	I	I	L	V	T	G	P	T	G	S	G	K	S	T
Template Known Secondary structure											.	.	.	.	.											T	T	S										T	T	T	T				G	G	G	S															T	S	S	S								S	T	T	S
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	Y	A	I	L	S	A	L	N	T	P	G	R	N	I	L	T	V	E	D	P	V	E	Y	E	L	E	G	I	G	Q	T	Q	V	N	T	R	V	D	M	S	F	A	R	G	L	R	A	I	L	R	Q	D	P	D	V	V	M	V	G	E	I	R	D	T	E	T	A	Q	I	A	V	Q	A	S	L	T	G	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	Y	A	G	L	Q	E	L	N	S	S	E	R	N	I	L	T	V	E	D	P	I	E	F	D	I	D	G	I	G	Q	T	Q	V	N	P	R	V	D	X	T	F	A	R	G	L	R	A	I	L	R	Q	D	P	D	V	V	X	V	G	E	I	R	D	L	E	T	A	Q	I	A	V	Q	A	S	L	T	G	H
Template Known Secondary structure													T	T	S							S	S			S			S	S	S						B	G	G	G	T	B										G	G	G			S					S				S													T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	S	T	L	H	T	N	S	A	S	G	A	V	T	R	L	R	D	M	G	V	E	S	F	L	L	S	S	S	L	A	G	I	I	A	Q	R	L	V	R	R	L	C	P	Q	C	R	Q	F	T	P	V	S	P	Q	Q	A	Q	M	F	K	Y	H	Q	L	A	V	T	T	I	G	T	P	V	G	C	P	H
Query Conservation
Alig confidence																																																																.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		L	V	X	S	T	L	H	T	N	T	A	V	G	A	V	T	R	L	R	D	X	G	I	E	P	F	L	I	S	S	S	L	L	G	V	L	A	Q	R	L	V	R	T	L	C	P	D	C	K	E	P	Y	E	A	D	K	E	Q	R	K	L	F	.	.	.	.	.	E	P	L	I	L	Y	R	A	T	G	C	P	K
Template Known Secondary structure										S	S	S											T																								T	T	T												T	T		.	.	.	.	.												S	S
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.						.	.	.	.	.	420	.	.	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	H	Q	S	G	Y	Q	G	R	M	A	I	H	E	M	M	V	V	T	P	E	L	R	A	A	I	H	E	N	V	D	E	Q	A	L	E	R	L	V	R	Q	Q	H	K	A	L	I	K	N	G	L	Q	K	V	I	S	G	D	T	S	W	D	E	V	M	R	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	N	H	K	G	Y	R	G	R	T	G	I	H	E	L	L	L	V	D	D	A	L	Q	E	L	I	H	S	E	A	G	E	Q	A	X	E	K	H	I	R	A	T	T	P	S	I	R	D	D	G	L	D	K	V	R	Q	G	I	T	S	L	E	E	V	X	R	G	S
Template Known Secondary structure		S		S	S	S																							T	T												T	T														T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions