Job Description P45759 Confidence 97.25% Date Wed Jan 25 15:20:55 GMT 2012 Rank 82 Aligned Residues 167 % Identity 23% Template c3pihA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:uvrabc system protein a; PDBTitle: t. maritima uvra in complex with fluorescein-modified dna Resolution 2.90 Å

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260										.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.												.								.
Query SS confidence																						.	.	.	.	.	.	.	.	.												.								.
Query Sequence		P	H	G	I	I	L	V	T	G	P	T	G	S	G	K	S	T	T	L	Y	.	.	.	.	.	.	.	.	.	A	I	L	S	A	L	N	T	P	G	R	.	N	I	L	T	V	E	D	.	P	V	E	Y	E	L	E	G	I	G	Q	T	Q	V	N	T	R	V	D	M	S	F	A	R	G	L	R	A	I	L	R
Query Conservation																						.	.	.	.	.	.	.	.	.												.								.
Alig confidence																						.	.	.	.	.	.	.	.	.												.								.									.	.
Template Conservation																																																											.	.
Template Sequence		K	N	R	L	V	V	I	T	G	V	S	G	S	G	K	S	S	L	A	M	D	T	I	Y	A	E	G	Q	R	R	Y	L	E	S	L	S	T	Y	K	K	P	D	V	D	E	I	E	G	L	S	P	A	I	A	I	D	Q	.	.	K	T	S	H	N	P	R	S	T	V	G	T	V	T	E	I	Y	D	Y	L	R
Template Known Secondary structure		T	T	S							S	T	T	S	S	S					T	T	T											T	T	S							S		S				T									S	.	.					S	T	T		B					T	T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		310										.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.																																																																				.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.																																																																				.	.	.
Query Sequence		Q	.	.	.	.	.	.	.	.	.	D	P	D	V	V	M	V	G	E	I	R	D	T	E	T	A	Q	I	A	V	Q	A	S	L	T	G	H	L	V	L	S	T	L	H	T	N	S	A	S	G	A	V	T	R	L	R	D	M	G	V	E	S	F	L	L	S	S	S	L	A	G	I	I	A	Q	R	L	.	.	.
Query Conservation			.	.	.	.	.	.	.	.	.																																																																				.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.																																		.	.	.	.																															.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		V	L	Y	A	R	I	G	K	A	H	C	P	E	C	G	R	P	L	E	K	K	S	I	D	E	I	L	Q	D	L	F	N	S	F	K	E	G	S	R	I	Y	I	L	.	.	.	.	A	P	L	V	V	D	R	L	I	L	E	T	R	N	E	H	R	I	L	D	S	L	E	L	A	M	R	E	G	K	G	F	V
Template Known Secondary structure							S				B		T	T	T			B		B															S		T	T							.	.	.	.												G	G	G																T	S
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
																378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	R	L	C	P	Q	C	R	Q	F	T	P	V	S	P	Q	Q	A	Q	M	F	K	Y	H	Q	L	A	V	T	T	I	G	T	P	V	G	.	C	P	H	C	H	Q	S	G	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.													.
Template Conservation																															.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	R	N	V	D	T	G	E	S	K	I	F	S	E	N	L	M	C	P	V	C	G	I	G	F	P	E	I	.	.	.	.	.	.	.	.	.	.	T	P	K	L	F	S	F	N	S	P	Y	G	A	C	P	N	C	H	G	L	G	F
Template Known Secondary structure						T	T	T								S	S		B		T	T	T								.	.	.	.	.	.	.	.	.	.	S	G	G	G	G		T	T	S	T	T	T	B		T	T	T	T	T	S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.											.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions