Job Description P45759 Confidence 99.64% Date Wed Jan 25 15:20:55 GMT 2012 Rank 10 Aligned Residues 158 % Identity 16% Template c2qq0B_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from thermotoga maritima in complex with2 thymidine + appnhp Resolution 1.50 Å

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	G	I	I	L	V	T	G	P	T	G	S	G	K	S	T	T	L	Y	A	I	L	S	A	L	N	T	P	G	R	N	I	L	T	V	E	D	P	V	E	Y	E	L	E	G	I	G	Q	T	Q	V	N	T	R	V	D	M	S	F	A	R	G	L	R	A	I	L	R	Q	D	P	D	V	V	M	V	G	E	I
Query Conservation
Alig confidence																																																												.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		S	G	K	L	T	V	I	T	G	P	M	Y	S	G	K	T	T	E	L	L	S	F	V	E	I	Y	K	L	G	K	K	K	V	A	V	F	K	P	K	S	T	M	I	V	S	H	V	E	A	H	V	I	E	R	P	E	E	M	.	.	.	.	.	.	R	K	Y	I	E	E	D	T	R	G	V	F	I	D	E	V
Template Known Secondary structure											S	T	T	S	S															T	T												B						B					S	S	G	G	G	G	.	.	.	.	.	.	G	G	G			T	T									G
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		321			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.					340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.
Predicted Secondary structure			.	.																			.	.	.	.																																																	.
Query SS confidence			.	.																			.	.	.	.																																																	.
Query Sequence		R	.	.	D	T	E	T	A	Q	I	A	V	Q	A	S	L	T	G	H	L	V	.	.	.	.	L	S	T	L	H	T	N	S	A	S	G	A	V	T	R	L	R	D	M	G	V	E	S	F	L	L	S	S	S	L	A	G	I	I	A	Q	R	L	V	R	R	L	C	P	Q	C	R	Q	.	F	T	P	V	S	P
Query Conservation			.	.																			.	.	.	.																																																	.
Alig confidence			.	.																			.	.	.	.																			.	.	.	.	.	.	.						.	.	.	.	.	.													.
Template Conservation																																													.	.	.	.	.	.	.						.	.	.	.	.	.
Template Sequence		Q	F	F	N	P	S	L	F	E	V	V	K	D	L	L	D	R	G	I	D	V	F	C	A	G	L	D	L	T	H	K	Q	N	P	F	E	T	T	A	L	L	L	S	.	.	.	.	.	.	.	L	A	D	T	V	.	.	.	.	.	.	I	K	K	K	A	V	C	H	R	C	G	E	Y	N	A	T	L	T	L
Template Known Secondary structure		G	G	S		T	T											T	T									S	B		T	T	S		B										.	.	.	.	.	.	.			S			.	.	.	.	.	.					B			T	T	T			S		B
Template Predicted Secondary structure																																													.	.	.	.	.	.	.						.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	A	Q	M	F	K	Y	H	Q	L	A	V	T	T	I	G	T	P	V	G	C	P	H	C
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		K	V	A	G	G	E	E	E	I	D	V	G	G	Q	E	K	Y	I	A	V	.	C	R	D	C
Template Known Secondary structure				S	S		S		S					S	T	T	T					.
Template Predicted Secondary structure																						.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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