Job Description P45759 Confidence 96.75% Date Wed Jan 25 15:20:55 GMT 2012 Rank 166 Aligned Residues 75 % Identity 24% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.											.	.	.	.	.	.	.					300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.								.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.								.	.	.	.
Query Sequence		I	I	L	V	T	G	P	T	G	S	G	K	S	T	T	L	Y	A	I	L	S	A	L	N	T	P	G	R	N	I	L	T	V	E	D	P	V	E	Y	E	L	E	G	I	G	Q	T	Q	V	.	.	.	.	.	.	.	.	.	.	N	T	R	V	D	M	S	.	.	.	.	F	A	R	G	L	R	A	I	L	R
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.								.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation
Template Sequence		V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L
Template Known Secondary structure								S	S	S	S	S	S	T	T	T										T	S	S	S					B						S	S	S		S											T	T							S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	P	D	V	V	M	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	Y	D	V	L	L	V	D
Template Known Secondary structure		T	T		S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions