 |
Job Description | P45759 | Confidence | 96.86% | Date | Wed Jan 25 15:20:55 GMT 2012 |
Rank | 145 | Aligned Residues | 46 |
% Identity | 17% | Template | c2hcbC_ |
PDB info |
PDB header:replication | Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa; |
PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus
|
Resolution | 3.51 Å |
|
  |   |
231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
|
|
. | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Q | D | L | E | N | L | I | Q | L | P | H | G | I | . |
. |
. |
I | L | V | T | G | P | T | G | S | G | K | S | T | T | L | Y | A | I | L | S | A | L | N | T | P | G | R | N | I | L | T | V |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Y | E | V | V | K | E | A | L | E | N | L | G | S | L | Y | N | P | I | F | I | Y | G | S | V | G | T | G | K | T | H | L | L | Q | A | A | G | N | E | A | K | K | R | G | Y | R | V | I | Y | S |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | T | T | T | T | T | S |
|
|  |  |  |  |  |
| S | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|