Job Description P45759 Confidence 100.00% Date Wed Jan 25 15:20:55 GMT 2012 Rank 2 Aligned Residues 327 % Identity 34% Template c2gszE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:twitching motility protein pilt; PDBTitle: structure of a. aeolicus pilt with 6 monomers per2 asymmetric unit Resolution 4.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		I	N	A	I	L	S	E	A	I	K	E	T	A	S	D	I	H	I	E	T	Y	E	K	T	M	S	I	R	F	R	I	D	G	V	L	R	T	I	L	Q	P	N	K	K	L	A	A	L	L	I	S	R	I	K	V	M	A	R	L	D	I	A	E	K	R	I	P	Q	D	G	R	I	S	L	R	I	G	.	R	R
Query Conservation																																																																															.
Alig confidence																									.	.	.																		.																																		.
Template Conservation																									.	.	.																		.
Template Sequence		I	L	E	I	I	K	E	A	I	E	L	G	A	S	D	I	H	L	T	A	G	A	P	.	.	.	P	A	V	R	I	D	G	Y	I	K	F	L	K	D	F	P	R	.	L	T	P	E	D	T	Q	K	L	A	Y	S	V	X	S	E	K	H	R	Q	K	L	E	E	N	G	Q	V	D	F	S	F	G	V	R	G
Template Known Secondary structure												T	T		S						S	S	S		.	.	.						T	T						T	T	S	S		.	S			S	T							T	T	S											S	S	B								T	T
Template Predicted Secondary structure																									.	.	.																		.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		N	I	D	V	R	V	S	T	L	P	S	I	Y	G	E	R	A	V	L	R	L	L	D	K	N	S	L	Q	L	S	L	N	N	L	G	M	T	A	A	D	K	Q	D	L	E	N	L	I	Q	L	P	H	G	I	I	L	V	T	G	P	T	G	S	G	K	S	T	T	L	Y	A	I	L	S	A	L	N	.	T	P
Query Conservation																																																																															.
Alig confidence																											.	.												.	.	.	.																																				.
Template Conservation																											.	.												.	.	.	.
Template Sequence		V	G	R	F	R	A	N	V	F	Y	Q	R	G	S	V	A	A	A	L	R	S	L	P	A	E	.	.	I	P	E	F	K	K	L	G	L	P	D	.	.	.	.	K	V	L	E	L	C	H	R	K	X	G	L	I	L	V	T	G	P	T	G	S	G	K	S	T	T	I	A	S	X	I	D	Y	I	N	Q	T	K
Template Known Secondary structure		S								B			S	S	S										S	S	.	.				G	G	G	G					.	.	.	.				G	G	G	G		S	S									S	S	S																	S
Template Predicted Secondary structure																											.	.												.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		G	R	N	I	L	T	V	E	D	P	V	E	Y	E	L	E	G	I	G	Q	T	Q	V	N	T	R	V	D	.	.	.	M	S	F	A	R	G	L	R	A	I	L	R	Q	D	P	D	V	V	M	V	G	E	I	R	D	T	E	T	A	Q	I	A	V	Q	A	S	L	T	G	H	L	V	L	S	T	L	H	T	N
Query Conservation																														.	.	.
Alig confidence																														.	.	.
Template Conservation
Template Sequence		S	Y	H	I	I	T	I	E	D	P	I	E	Y	V	F	K	H	K	K	S	I	V	N	Q	R	E	V	G	E	D	T	K	S	F	A	D	A	L	R	A	A	L	R	E	D	P	D	V	I	F	V	G	E	X	R	D	L	E	T	V	E	T	A	L	R	A	A	E	T	G	H	L	V	F	G	T	L	H	T	N
Template Known Secondary structure										S	S			S					S	S	S							B	T	T	T	B	S										T	T	S			S					S				S												T	T	T										S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.							.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		S	A	S	G	A	V	T	R	L	R	D	M	G	V	E	S	.	.	.	.	.	.	F	L	L	S	S	S	L	A	G	I	I	A	Q	R	L	V	R	R	L	C	P	Q	C	R	Q	F	T	P	V	S	P	Q	Q	A	Q	M	F	K	Y	H	Q	L	A	V	T	T	I	G	T	P	V	G	C	P	H	C	H	Q
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	I	D	T	I	H	R	I	V	D	I	F	P	L	N	Q	Q	E	Q	V	R	I	V	L	S	F	I	L	Q	G	I	I	S	Q	R	L	L	P	K	I	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S								T	G	G	G	S		T	T	T	T																							S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	Y	Q	G	R	M	A	I	H	E	M	M	V	V	T	P	E	L	R	A	A	I	H	E	N	V	D	E	Q	A	L	E	R	L	V	R	Q	Q	H	K	A	L	I	K	N	G	L	Q	K	V	I	S	G	D	T	S	W	D	E	V	M	R	V	A	S	A	T	L	E	S	E
Query Conservation
Alig confidence		.	.	.	.																															.	.	.
Template Conservation		.	.	.	.																															.	.	.
Template Sequence		.	.	.	.	G	R	V	L	A	Y	E	L	L	I	P	N	T	A	I	R	N	L	I	R	E	N	K	L	Q	Q	V	Y	S	L	.	.	.	X	Q	X	Q	T	X	N	Q	T	L	Y	K	L	Y	K	Q	G	L	I	T	L	E	D	A	X	E	A	S	P	D	P	K	E	L	E
Template Known Secondary structure		.	.	.	.	S																				T	T								T	.	.	.				B		T	T								T	T	T	S	S		T	T	T						S		S	T	T	S	S
Template Predicted Secondary structure		.	.	.	.																															.	.	.
Template SS confidence
						288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions