Job Description P45759 Confidence 100.00% Date Wed Jan 25 15:20:55 GMT 2012 Rank 5 Aligned Residues 229 % Identity 37% Template c2eyuA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:twitching motility protein pilt; PDBTitle: the crystal structure of the c-terminal domain of aquifex2 aeolicus pilt Resolution 1.87 Å

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		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		L	S	L	N	N	L	G	M	T	A	A	D	K	Q	D	L	E	N	L	I	Q	L	P	H	G	I	I	L	V	T	G	P	T	G	S	G	K	S	T	T	L	Y	A	I	L	S	A	L	N	.	T	P	G	R	N	I	L	T	V	E	D	P	V	E	Y	E	L	E	G	I	G	Q	T	Q	V	N	T	R	V	D
Query Conservation																																																			.
Alig confidence												.	.	.	.																																				.
Template Conservation												.	.	.	.
Template Sequence		P	E	F	K	K	L	G	L	P	D	.	.	.	.	K	V	L	E	L	C	H	R	K	X	G	L	I	L	V	T	G	P	T	G	S	G	K	S	T	T	I	A	S	X	I	D	Y	I	N	Q	T	K	S	Y	H	I	I	T	I	E	D	P	I	E	Y	V	F	K	H	K	K	S	I	V	N	Q	R	E	V	G
Template Known Secondary structure				G	G	G	S	S			T	.	.	.	.					G	G	G		S	S								S	T	T		S																									S	S			S					S	S	S							B	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		298				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.							.	.	.	.
Predicted Secondary structure			.	.	.																																																																			.	.	.	.	.	.
Query SS confidence			.	.	.																																																																			.	.	.	.	.	.
Query Sequence		M	.	.	.	S	F	A	R	G	L	R	A	I	L	R	Q	D	P	D	V	V	M	V	G	E	I	R	D	T	E	T	A	Q	I	A	V	Q	A	S	L	T	G	H	L	V	L	S	T	L	H	T	N	S	A	S	G	A	V	T	R	L	R	D	M	G	V	E	S	F	L	.	.	.	.	.	.	L	S	S	S
Query Conservation			.	.	.																																																																			.	.	.	.	.	.
Alig confidence			.	.	.																																																																			.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	T	K	S	F	A	D	A	L	R	A	A	L	R	E	D	P	D	V	I	F	V	G	E	X	R	D	L	E	T	V	E	T	A	L	R	A	A	E	T	G	H	L	V	F	G	T	L	H	T	N	T	A	I	D	T	I	H	R	I	V	D	I	F	P	L	N	Q	Q	E	Q	V	R	I	V	L	S	F	I
Template Known Secondary structure		T	T	B	S															S					S				S													T	T										S	S											T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	I	I	A	Q	R	L	V	R	R	L	C	P	Q	C	R	Q	F	T	P	V	S	P	Q	Q	A	Q	M	F	K	Y	H	Q	L	A	V	T	T	I	G	T	P	V	G	C	P	H	C	H	Q	S	G	Y	Q	G	R	M	A	I	H	E	M	M	V	V	T	P	E	L	R	A	A	I	H	E	N	V	D
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	G	I	I	S	Q	R	L	L	P	K	I	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	V	L	A	Y	G	L	L	I	P	N	T	A	I	R	N	L	I	R	E	N	K	L
Template Known Secondary structure														S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S																				T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.																																										.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		449	450	.	.	.	.	.	.	.					.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		E	Q	A	L	E	R	L	V	R	.	.	.	.	Q	Q	H	K	A	L	I	K	N	G	L	Q	K	V	I	S	G	D	T	S	W	D	E	V	M	R	V	A	S	A	T	L	E	S	E
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.
Template Conservation
Template Sequence		Q	Q	V	Y	S	L	X	Q	S	G	Q	A	E	T	G	X	Q	T	X	N	Q	T	L	Y	K	L	Y	K	Q	G	L	I	T	L	E	D	A	X	E	A	S	P	D	P	K	E	L	E
Template Known Secondary structure											S		S		T	T														T	T	S	S										S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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