Return to main results Retrieve Phyre Job Id

Job DescriptionP45759
Confidence97.35%DateWed Jan 25 15:20:55 GMT 2012
Rank74Aligned Residues150
% Identity20%Templatec1qvrB_
PDB info PDB header:chaperoneChain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   239240.........250.........260.........270.........280.........290.........300.........310........
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  QLPHGIILVTGPTGSGKSTTLYAILSALNTPGRNILTVEDPVEYELEGIGQTQVNTRVDMSFARGLRAILRQDPDVVMVG
Query Conservation      
















 
 
         
 






     
 
  
    
  
   

  

 




 

Alig confidence 






































.













..........















Template Conservation   

    

 







 





  
       
  
.


         
 ..........
 
  
  
  

 

Template Sequence  NRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRID. MTEYMEKHAVSRLQ. . . . . . . . . . LTEAVRRRPYSVILFD
Template Known Secondary structure  SS
SBSSSSSSSSGGG
.TTT

SSGGGGG

..........
SSS
Template Predicted Secondary structure 














.




..........




Template SS confidence 















































































   585....590.........600.........610.........620... ......630....... ..640.........650...
 
   319320 .........330........ .340.........350.........360.........370......... 380.
Predicted Secondary structure 

..





............






...
Query SS confidence 

. .

















. . . . . . . . . . . .








































. . .

Query Sequence  EI. . RDTETAQIAVQASLTGHL. . . . . . . . . . . . VLSTLHTNSASGAVTRLRDMGVESFLLSSSLAGIIAQRLVR. . . RL
Query Conservation 

..

 


  
  

 



............






  
  

 

   
     

  
 


 




... 
Alig confidence 

..

















............








































...

Template Conservation 




   
   

  

 
 
 
  
      
 


 


                              
 
    
Template Sequence  EIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNR
Template Known Secondary structure  SGGGS
TTT

SSS


TT

TTTT

TTTS
T
Template Predicted Secondary structure 


























Template SS confidence 















































































   668.670.........680.........690.........700.........710.........720.........730.........740.......
 
   382.......390.........
Predicted Secondary structure 











Query SS confidence 

















Query Sequence  CPQCRQFTPVSPQQAQMF
Query Conservation 

 

            
Alig confidence 

















Template Conservation   
 

 
  
       
Template Sequence  LDEIVVFRPLTKEQIRQI
Template Known Secondary structure 
SB

B




Template Predicted Secondary structure 






Template SS confidence 

















   748.750.........760.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions