Job Description P45759 Confidence 96.98% Date Wed Jan 25 15:20:55 GMT 2012 Rank 127 Aligned Residues 81 % Identity 22% Template c1nsfA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:n-ethylmaleimide sensitive factor; PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf) Resolution 1.90 Å

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		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	D	L	E	N	L	I	Q	L	P	H	G	I	I	L	V	T	G	P	T	G	S	G	K	S	T	T	L	Y	A	I	L	S	A	L	N	T	P	G	R	N	I	L	T	V	E	D	P	V	E	Y	E	L	E	G	I	G	Q	T	Q	V	N	T	R	V	D	M	S	F	A	R	G	L	R	A	I	L	R	Q
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	Q	T	K	N	S	D	R	T	P	L	V	S	V	L	L	E	G	P	P	H	S	G	K	T	A	L	A	A	K	I	A	E	E	S	N	F	P	F	I	K	I	C	S	P	D	K	M	I	G	F	S	E	.	.	.	.	.	.	.	.	.	T	A	K	C	Q	A	M	K	K	I	F	D	D	A	Y	K	S
Template Known Secondary structure									S	S		S									S	T	T	S	S															S							G	G	G	S	T	T				.	.	.	.	.	.	.	.	.																T	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.										.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	D	V	V	M	V	G	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	S	C	V	V	V	D	D	I
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		596	.	.	.	600	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions