Return to main results Retrieve Phyre Job Id

Job DescriptionP42596
Confidence99.38%DateThu Jan 5 12:01:41 GMT 2012
Rank256Aligned Residues109
% Identity17%Templated1yuba_
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases rRNA adenine dimethylase-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   217..220.........230.........240.........250.........260.........270.........280.........290.. ...
Predicted Secondary structure 





























.


Query SS confidence 











































































.


Query Sequence  ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS. GVE
Query Conservation 

 

  

     







 
 
   

   
   
  

 
  

  
  
   
       
     
   .   
Alig confidence 
































..























.....











.


Template Conservation     

          




 
 
 

  
   ..   
 




  
   
       .....    

  
 
     
Template Sequence  LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI. . SKQVTSIELDSHLFNLSSEKLKLN. . . . . TRVTLIHQDILQFQFP
Template Known Secondary structure 



SS
S


SS
S..SSSSSS
SSSSSSS
TTTT
.....S

S

TTTT

Template Predicted Secondary structure 











..








.....








Template SS confidence 















































































   18.20.........30.........40.........50 .........60.........70.... .....80.........90
 
   296...300.........310.........320..... ....330......
Predicted Secondary structure 










..............




Query SS confidence 





























. . . . . . . . . . . . . .










Query Sequence  PFRFNAVLCNPPFHQQHALTDNVAWEMFHH. . . . . . . . . . . . . . ARRCLKINGEL
Query Conservation     

 

 




             
  ..............
 
 




 
Alig confidence 













....











..............










Template Conservation        

 



 ....


 

   
        
 
 


 
 

 
  
 
Template Sequence  NKQRYKIVGNIPYH. . . . LSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTL
Template Known Secondary structure 
SS

SS....S



SS
GGGS
Template Predicted Secondary structure 






....








Template SS confidence 






















































   91........100.... .....110.........120.........130.........140.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions