 |
Job Description | P42596 | Confidence | 53.22% | Date | Thu Jan 5 12:01:41 GMT 2012 |
Rank | 435 | Aligned Residues | 69 |
% Identity | 12% | Template | d1j6ua1 |
SCOP info | MurCD N-terminal domain
| MurCD N-terminal domain
| MurCD N-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
229 | 230 | . | . | . | . | . | . | . | |
. | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | E | I | V | D | L | G | C | . |
G | N | G | V | I | G | L | T | L | L | D | K | N | P | Q | A | K | V | V | F | V | D | E | S | P | M | A | V | A | S | S | R | L | N | V | E | T | N | M | P | E | A | L | D | R | C | E | F | M | I | N | N | A | L | S | G | V | E | P | F | R | F | N | A | V | L | C | N | P | P |
Query Conservation |   |
  |   |
|
|
|
|
|
|
| . |
|   |
|   |
|   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|
|   |
|   |
|
|   |
|
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   | . | . |   |
|   |
|
|   |
|
|
|
Template Sequence |   |
H | X | K | I | H | F | V | G | I | G | G | I | G | X | S | A | V | A | L | H | E | F | S | N | G | N | D | V | Y | G | S | N | I | E | E | T | E | R | T | A | Y | L | R | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | G | I | P | I | F | V | P | H | S | A | D | N | W | Y | D | . |
. |
P | D | L | V | I | K | T | P | A |
Template Known Secondary structure |   |
|
|  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | T | T |
|
|  |  | S | S |
|
| T | T | S |
|
|
| . | . |
| S |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
| . | . |
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
0 | . | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . |
  |
  |   |
308 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
F |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
V |
Template Known Secondary structure |   |
|
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
69 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|