Return to main results Retrieve Phyre Job Id

Job DescriptionP42596
Confidence99.20%DateThu Jan 5 12:01:41 GMT 2012
Rank272Aligned Residues129
% Identity15%Templated1ej0a_
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases RNA methyltransferase FtsJ
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240......... 250.........260.........270.........280.........290.. ....
Predicted Secondary structure 








.

















.........



Query SS confidence 






















.










































. . . . . . . . .



Query Sequence  NLEGEIVDLGCGNGVIGLTLLDK. NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS. . . . . . . . . GVEP
Query Conservation      







 
 
   

  . 
   
  

 
  

  
  
   
       
     
   .........    
Alig confidence 






















.












..............















.........



Template Conservation   

  




 



 
   
      
 
 



  ..............                             
Template Sequence  KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP. . . . . . . . . . . . . . MDPIVGVDFLQGDFRDELVMKALLERVGD
Template Known Secondary structure 
TT
S
TT

TT
SS
..............



TTS
TTSTT
Template Predicted Secondary structure 















..............













Template SS confidence 















































































   50.........60.........70.........80...... ...90.........100.........110.....
 
   297..300.........310......... 320.........330.........340.........350.........360.........370
Predicted Secondary structure 









......















Query SS confidence 






















. . . . . .


















































Query Sequence  FRFNAVLCNPPFHQQHALTDNVA. . . . . . WEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK
Query Conservation    

 

 




          ......   
  
 
 




 
 

 

 
 
   
   
     

    
 
  
Alig confidence 






















......























.












........




Template Conservation     
 

 
      
    
      
    
  
   




  
 


  .     
   
   ........
  
 
Template Sequence  SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG. EGFDEYLREIRSL. . . . . . . . FTKVK
Template Known Secondary structure 








S
SS.TT........
Template Predicted Secondary structure 

























.

........

Template SS confidence 















































































   116...120.........130.........140.........150.........160........ .170.........180. .....
 
   371.......
Predicted Secondary structure 




Query SS confidence 







Query Sequence  AVKLGRRR
Query Conservation 
 
     
Alig confidence 







Template Conservation    

  

Template Sequence  VRKPDSSR
Template Known Secondary structure 

TTS
Template Predicted Secondary structure 





Template SS confidence 







   187..190....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions