Job Description P42596 Confidence 44.20% Date Thu Jan 5 12:01:41 GMT 2012 Rank 453 Aligned Residues 119 % Identity 15% Template c3uuwB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase with nad(p)-binding rossmann-fold PDBTitle: 1.63 angstrom resolution crystal structure of dehydrogenase (mvim)2 from clostridium difficile. Resolution 1.63 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		228	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure														.					.																.
Query SS confidence														.					.																.
Query Sequence		L	E	G	E	I	V	D	L	G	C	G	N	.	G	V	I	G	.	L	T	L	L	D	K	N	P	Q	A	K	V	V	F	V	.	D	E	S	P	M	A	V	A	S	S	R	L	N	V	E	T	N	M	P	E	A	L	D	R	C	E	F	M	I	N	N	A	L	S	G	V	E	P	F	R	F	N	A	V	L	C
Query Conservation														.					.																.
Alig confidence														.					.																.															.	.	.	.	.	.	.	.	.					.
Template Conservation																																																		.	.	.	.	.	.	.	.	.					.
Template Sequence		K	N	I	K	M	G	M	I	G	L	G	S	I	A	Q	K	A	Y	L	P	I	L	T	K	S	E	R	F	E	F	V	G	A	F	T	P	N	K	V	K	R	E	K	I	C	S	D	Y	.	.	.	.	.	.	.	.	.	R	I	M	P	.	F	D	S	I	E	S	L	A	K	K	C	D	C	I	F	L	H	S
Template Known Secondary structure												S							T					T	S		S	S	S								S													.	.	.	.	.	.	.	.	.	T			B	.		S	S						T	T		S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.					.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		305	.	.	.	.																		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Query Sequence		N	P	P	F	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	H	A	L	T	D	N	V	A	W	E	M	F	H	H	A	R	R	C	L	K	I	N	G	E	L	Y	I	V	A	.	.	N	R	H	L	D	Y	F	H	K	L	K	K	I	F	G	N	C	T	T	I
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.								.	.
Template Conservation																																												.	.	.	.
Template Sequence		S	T	E	T	H	Y	E	I	I	K	I	L	L	N	L	G	V	H	V	Y	V	D	K	P	L	A	S	T	V	S	Q	G	E	E	L	I	E	L	S	T	K	K	.	.	.	.	N	L	N	L	M	V	G	F	N	R	R	F	C	P	M	Y	K	E	I	K	N	N	A	T	E	I	V	S	I
Template Known Secondary structure																T	T							S	S	S	S	S	S															.	.	.	.	T								G	G	G	G													S
Template Predicted Secondary structure																																												.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions