Return to main results Retrieve Phyre Job Id

Job DescriptionP42596
Confidence96.72%DateThu Jan 5 12:01:41 GMT 2012
Rank316Aligned Residues75
% Identity15%Templatec3swrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: structure of human dnmt1 (601-1600) in complex with sinefungin
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   225....230.........240.........250.........260.........270.........280.........290..
Predicted Secondary structure 




























............
Query SS confidence 



































































. . . . . . . . . . . .
Query Sequence  PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS. . . . . . . . . . . .
Query Conservation 
     







 
 
   

   
   
  

 
  

  
  
   
       
     
   ............
Alig confidence 















































........











............
Template Conservation      

  





 






  

  

  
 


  
  

  
 ........
       

              
Template Sequence  IKLPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN. . . . . . . . PGSTVFTEDCNILLKLVMAGETTN
Template Known Secondary structure 




S
TTSTS
SS
........TTS
S
T
SB
Template Predicted Secondary structure 


















........







Template SS confidence 















































































   1134.....1140.........1150.........1160.........1170.........1180. ........1190.........1200.....
 
   293......300.......
Predicted Secondary structure  .....







Query SS confidence  . . . . .














Query Sequence  . . . . . GVEPFRFNAVLCNPP
Query Conservation  .....      

 

 


Alig confidence  .....














Template Conservation       

  





 



Template Sequence  SRGQRLPQKGDVEMLCGGPP
Template Known Secondary structure  TT

B


TTT
S


Template Predicted Secondary structure 













Template SS confidence 



















   1206...1210.........1220.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions