Job Description P42596 Confidence 97.98% Date Thu Jan 5 12:01:41 GMT 2012 Rank 301 Aligned Residues 131 % Identity 11% Template c3lkzB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:non-structural protein 5; PDBTitle: structural and functional analyses of a conserved hydrophobic pocket2 of flavivirus methyltransferase Resolution 2.00 Å

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		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	F	M	Q	H	L	P	E	N	L	E	G	E	I	V	D	L	G	C	G	N	G	V	I	G	L	T	L	L	D	K	N	P	Q	A	K	V	V	F	V	D	E	S	P	M	A	V	A	S	S	R	L	N	V	E	T	N	M	P	E	A	L	D	R	C	E	F	M	I	N	N	A	L	S	G	V	E	P	F
Query Conservation
Alig confidence																																																	.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		R	W	L	V	E	R	R	F	L	E	P	V	G	K	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	M	A	T	Q	K	R	V	Q	E	V	R	G	Y	T	K	G	G	P	G	.	.	.	.	H	E	E	P	Q	L	V	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	Y	R	P	S	E
Template Known Secondary structure							T	T	S											T		T	T								T	T		T	T											S	T	T	.	.	.	.	S								B	T	T	G	G	G						S			T	T	S	S
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure											.																												.
Query SS confidence											.																												.
Query Sequence		R	F	N	A	V	L	C	N	P	.	P	F	H	Q	Q	H	A	L	T	D	N	V	A	W	E	M	F	H	H	A	R	R	C	L	K	I	N	.	G	E	L	Y	I	V	A	N	R	H	L	D	Y	F	H	K	L	K	K	I	F
Query Conservation											.																												.
Alig confidence											.																												.		.	.
Template Conservation																																									.	.
Template Sequence		C	C	D	T	L	L	C	D	I	G	E	S	S	S	S	A	E	V	E	E	H	R	T	I	R	V	L	E	M	V	E	D	W	L	H	R	G	P	R	.	.	E	F	C	V	K	V	L	C	P	Y	M	P	K	V	I	E	K	M
Template Known Secondary structure				S											S																					T	T				.	.							S		T	T	S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions