Job Description P42596 Confidence 99.69% Date Thu Jan 5 12:01:41 GMT 2012 Rank 122 Aligned Residues 149 % Identity 17% Template c3id5F_ PDB info PDB header:transferase/ribosomal protein/rna Chain: F: PDB Molecule:fibrillarin-like rrna/trna 2'-o-methyltransferase; PDBTitle: crystal structure of sulfolobus solfataricus c/d rnp assembled with2 nop5, fibrillarin, l7ae and a split half c/d rna Resolution 4.01 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		F	S	R	T	G	L	D	I	G	A	R	F	F	M	Q	H	L	P	E	N	L	E	G	E	I	V	D	L	G	C	G	N	G	V	I	G	L	T	L	L	D	K	N	.	P	Q	A	K	V	V	F	V	D	E	S	P	M	A	V	A	S	S	R	L	N	V	E	T	N	M	P	E	A	L	D	R	C	E	F	M
Query Conservation																																													.
Alig confidence																																													.																										.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		A	F	R	S	K	L	A	G	A	I	L	K	G	L	K	T	N	P	I	R	K	G	T	K	V	L	Y	L	G	A	A	S	G	T	T	I	S	H	V	S	D	I	I	E	L	N	G	K	A	Y	G	V	E	F	S	P	R	V	V	R	E	L	L	L	V	A	Q	R	R	.	.	.	.	.	P	N	I	F	P	L
Template Known Secondary structure		T	T	T									T	T		S						T	T							T		T	T	S												T	T	S																							.	.	.	.	.	T	T
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130
		287	.	.	290	.	.					.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.						.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																																																				.	.	.	.	.
Query SS confidence								.	.	.	.																																																				.	.	.	.	.
Query Sequence		I	N	N	A	L	S	.	.	.	.	G	V	E	P	F	R	F	N	A	V	L	C	N	P	P	F	H	Q	Q	H	A	L	T	D	N	V	A	W	E	M	F	H	H	A	R	R	C	L	K	I	N	G	E	L	Y	I	V	A	N	R	H	.	.	.	.	.	L	D	Y	F	H	K	L	K	K	I	F	G	N	C
Query Conservation								.	.	.	.																																																				.	.	.	.	.
Alig confidence								.	.	.	.																		.	.	.	.	.	.	.																												.	.	.	.	.											.	.	.	.
Template Conservation																													.	.	.	.	.	.	.																																											.	.	.	.
Template Sequence		L	A	D	A	R	F	P	Q	S	Y	K	S	V	V	E	N	V	D	V	L	Y	V	D	I	A	Q	P	.	.	.	.	.	.	.	D	Q	T	D	I	A	I	Y	N	A	K	F	F	L	K	V	N	G	D	M	L	L	V	I	K	A	V	T	K	D	P	K	E	I	Y	K	T	E	V	E	K	L	.	.	.	.
Template Known Secondary structure					T	T		G	G	G	T	T	T	T												S		T	.	.	.	.	.	.	.	T																													S	S	S	S	S	T	T							.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.																																											.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.								.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	I	A	T	N	N	K	F	V	V	L	K	A	V	K	L	G	R
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	N	S	N	F	E	T	I	Q	I	I	N	L	D	P
Template Known Secondary structure		.	.	.	.		T	T	T										T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						204	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions