Job Description P42596 Confidence 98.81% Date Thu Jan 5 12:01:41 GMT 2012 Rank 286 Aligned Residues 133 % Identity 15% Template c3douA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase j; PDBTitle: crystal structure of methyltransferase involved in cell2 division from thermoplasma volcanicum gss1 Resolution 1.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	E	G	E	I	V	D	L	G	C	G	N	G	V	I	G	L	T	L	L	D	K	N	P	Q	A	K	V	V	F	V	D	E	S	P	M	A	V	A	S	S	R	L	N	V	E	T	N	M	P	E	A	L	D	R	C	E	F	M	I	N	N	A	L	S	G	V	E	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	G	D	A	V	I	E	I	G	S	S	P	G	G	W	T	Q	V	L	N	S	L	.	.	A	R	K	I	I	S	I	D	L	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	E	E	I	A	G	V	R	F	I	R	C	D	I	F	K	E	T	I	F	D	D	I	D	R	A	L	R	E	E
Template Known Secondary structure			T	T							S		T	T								T	T	T	.	.		S							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T								T	T	S	S	S
Template Predicted Secondary structure																									.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70															.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
			296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.							320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.
Predicted Secondary structure		.																									.	.	.	.	.	.																										.	.	.																	.
Query SS confidence		.																									.	.	.	.	.	.																										.	.	.																	.
Query Sequence		.	P	F	R	F	N	A	V	L	C	N	P	P	F	H	Q	Q	H	A	L	T	D	N	V	A	.	.	.	.	.	.	W	E	M	F	H	H	A	R	R	C	L	K	I	N	G	E	L	Y	I	V	A	N	R	H	L	.	.	.	D	Y	F	H	K	L	K	K	I	F	G	N	C	T	T	I	.	A	T	N	N
Query Conservation		.																									.	.	.	.	.	.																										.	.	.																	.
Alig confidence		.																									.	.	.	.	.	.																										.	.	.																	.
Template Conservation
Template Sequence		G	I	E	K	V	D	D	V	V	S	D	A	X	A	K	V	S	G	I	P	S	R	D	H	A	V	S	Y	Q	I	G	Q	R	V	X	E	I	A	V	R	Y	L	R	N	G	G	N	V	L	L	K	Q	F	Q	G	D	X	T	N	D	F	I	A	I	W	R	K	N	F	S	S	Y	K	I	S	K	P	S	S	E
Template Known Secondary structure		T		S	S														S																																					S	T										G	G	G
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		365	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	V	V	L	K	A	V	K	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	I	X	F	F	G	F	K	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions