Job Description P42596 Confidence 99.61% Date Thu Jan 5 12:01:41 GMT 2012 Rank 181 Aligned Residues 151 % Identity 15% Template c3bt7A_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna (uracil-5-)-methyltransferase; PDBTitle: structure of e. coli 5-methyluridine methyltransferase trma2 in complex with 19 nucleotide t-arm analogue Resolution 2.43 Å

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		L	E	G	T	D	W	T	I	H	N	H	A	N	V	F	S	R	T	G	L	D	I	G	A	R	F	.	.	.	F	M	Q	H	L	P	E	N	L	E	G	E	I	V	D	L	G	C	G	N	G	V	I	G	L	T	L	L	D	K	N	P	Q	A	K	V	V	F	V	D	E	S	P	M	A	V	A	S	S	R	L
Query Conservation																												.	.	.
Alig confidence																												.	.	.							.																										.	.
Template Conservation																																					.																										.	.
Template Sequence		V	A	G	K	E	M	I	Y	R	Q	V	E	N	S	F	T	Q	P	N	A	A	M	N	I	Q	M	L	E	W	A	L	D	V	T	K	.	G	S	K	G	D	L	L	E	L	Y	C	G	N	G	N	F	S	L	A	L	A	R	N	F	D	.	.	R	V	L	A	T	E	I	A	K	P	S	V	A	A	A	Q	Y
Template Known Secondary structure		B	T	T	B								T	T	S				S	B															T	T	.	T			S						S		T	T	S							G	G	G	S	S	.	.
Template Predicted Secondary structure																																					.																										.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.																		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	E	T	N	M	P	E	A	L	D	R	C	E	F	M	I	N	N	A	L	S	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	F	R	F	N	A	V	L	C	N	P	P	F	H	Q	Q	H	A	L	T	D	N	V	A	W	E	M	F	H	H	A	R	R	C	L	K	I	N
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	A	A	N	H	I	.	.	.	D	N	V	Q	I	I	R	M	A	A	E	E	F	T	Q	A	M	N	G	V	R	E	F	N	R	L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	P	P	R	S	G	.	.	.	.	.	.	.	.	.	.	.	L	D	S	E	T	E	K	M	V	Q	A	Y
Template Known Secondary structure						T	T		.	.	.		S								S								S	S					T	T	G	G	G	S		G	G	G												T	T		.	.	.	.	.	.	.	.	.	.	.										T	T	S
Template Predicted Secondary structure									.	.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.												.	.	.	.	.	310	.	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	L	Y	I	V	A	N	R	H	L	D	Y	F	H	K	L	K	K	I	F	G	N	C	T	T	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	I	L	Y	I	S	C	N	P	E	T	L	C	K	N	L	E	T	L	S	Q	T	H	K	V	E	R
Template Known Secondary structure		S							S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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