Job Description P42596 Confidence 99.54% Date Thu Jan 5 12:01:41 GMT 2012 Rank 223 Aligned Residues 141 % Identity 19% Template c3axtA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine Resolution 2.49 Å

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																										.	.	.	.																		.																								.
Query SS confidence																										.	.	.	.																		.																								.
Query Sequence		V	S	W	K	L	E	G	T	D	W	T	I	H	N	H	A	N	V	F	S	R	T	G	L	.	.	.	.	D	I	G	A	R	F	F	M	Q	H	L	P	E	N	L	E	G	.	E	I	V	D	L	G	C	G	N	G	V	I	G	L	T	L	L	D	K	N	P	Q	A	.	K	V	V	F	V	D	E	S	P	M
Query Conservation																										.	.	.	.																		.																								.
Alig confidence																										.	.	.	.																		.																								.
Template Conservation
Template Sequence		A	K	I	I	V	P	E	I	P	K	T	V	S	S	D	M	P	V	F	Y	N	P	R	M	R	V	N	R	D	L	A	V	L	G	L	E	Y	L	C	K	K	L	G	R	P	V	K	V	A	D	P	L	S	A	S	G	I	R	A	I	R	F	L	L	E	T	S	C	V	E	K	A	Y	A	N	D	I	S	S	K
Template Known Secondary structure											S	S			T	T			S	S			G	G	G																				S							S	S		T	T	T											S										S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		A	V	A	S	S	R	L	N	V	E	T	N	M	P	E	A	L	D	R	C	E	F	M	I	N	N	A	.	.	.	L	S	G	V	E	P	F	R	F	N	A	V	L	C	N	P	P	F	H	Q	Q	H	A	L	T	D	N	V	A	W	E	M	F	H	H	A	R	R	C	L	K	I	N	G	E	L	Y	I	V	A
Query Conservation																													.	.	.
Alig confidence																		.											.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation																		.																															.	.	.	.	.	.	.	.	.
Template Sequence		A	I	E	I	M	K	E	N	F	K	L	N	N	I	P	E	.	D	R	Y	E	I	H	G	M	E	A	N	F	F	L	R	K	E	W	G	F	G	F	D	Y	V	D	L	D	P	F	.	.	.	.	.	.	.	.	.	G	T	P	V	P	F	I	E	S	V	A	L	S	M	K	R	G	G	I	L	S	L	T	A
Template Known Secondary structure													T	T			G	.	G	G						S							T	S			S	S										S	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																		.																															.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.										.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions