Return to main results Retrieve Phyre Job Id

Job DescriptionP42596
Confidence99.56%DateThu Jan 5 12:01:41 GMT 2012
Rank208Aligned Residues133
% Identity15%Templatec3a4tA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative methyltransferase mj0026; PDBTitle: crystal structure of atrm4 from m.jannaschii with sinefungin
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220.........230.........240......... 250.........260.........270.........280.........290..
Predicted Secondary structure 












.

















Query SS confidence 



































.










































Query Sequence  DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK. NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS
Query Conservation 
 


 

  

     







 
 
   

  . 
   
  

 
  

  
  
   
       
     
   
Alig confidence 



































.



























...











Template Conservation 
  
      
    
  


 


 
 

  
         
 
 
    
   
       
 ...            
Template Sequence  SISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV. . . LNTIIINADMRK
Template Known Secondary structure 
GGGG


TT
SS
TT
TTT
SS
TT
...
SS
Template Predicted Secondary structure 




















...








Template SS confidence 















































































   6970.........80.........90.........100.........110.........120.........130... ......140.....
 
   293......300.........310....... ..320.........330.........340.........
Predicted Secondary structure  .....













.....








Query SS confidence  . . . . .
























. . . . .































Query Sequence  . . . . . GVEPFRFNAVLCNPPFHQQHALTDN. . . . . VAWEMFHHARRCLKINGELYIVANRHLDYFHK
Query Conservation  .....      

 

 




        .....     
  
 
 




 
 

 

 
 
   
Alig confidence  .....
























.....































Template Conservation              
 

 
 


              
  

  
   




 






   



Template Sequence  YKDYLLKNEIFFDKILLDAPCSGNISEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENE
Template Known Secondary structure  TT



GGG

S


GGGT
Template Predicted Secondary structure 


































Template SS confidence 


































































   146...150.........160.........170.........180.........190.........200.........210..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions