Job Description P42596 Confidence 99.76% Date Thu Jan 5 12:01:41 GMT 2012 Rank 72 Aligned Residues 174 % Identity 17% Template c2yx1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:hypothetical protein mj0883; PDBTitle: crystal structure of m.jannaschii trna m1g37 methyltransferase Resolution 2.20 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	P	Q	T	V	S	W	K	L	E	G	T	D	W	T	I	H	N	H	A	N	V	F	S	R	T	G	L	D	I	G	A	R	F	F	M	Q	H	L	P	E	N	L	E	G	E	I	V	D	L	G	C	G	N	G	V	I	G	L	T	L	L	D	K	N	P	Q	A	K	V	V	F	V	D	E	S	P	M	A
Query Conservation
Alig confidence																																				.									.	.																				.	.	.
Template Conservation																																				.									.	.																				.	.	.
Template Sequence		E	N	R	T	L	T	I	H	K	E	N	G	Y	R	L	W	V	D	I	A	K	V	Y	F	S	P	R	L	G	G	E	R	A	R	.	I	X	K	K	V	S	L	N	.	.	D	V	V	V	D	X	F	A	G	V	G	P	F	S	I	A	C	K	N	.	.	.	A	K	K	I	Y	A	I	D	I	N	P	H	A
Template Known Secondary structure												T	T							T	T	T	S				G	G	G							.							T	T	.	.						T	T		T	T	S						T	T	T	.	.	.	S	S							S
Template Predicted Secondary structure																																				.									.	.																				.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	S	S	R	L	N	V	E	T	N	M	P	E	A	L	D	R	C	E	F	M	I	N	N	A	L	S	G	V	E	P	F	R	F	N	A	V	L	C	N	P	P	F	H	Q	Q	H	A	L	T	D	N	V	A	W	E	M	F	H	H	A	R	R	C	L	K	I	N	G	E	L	Y	I	V	A	N	R	H	L
Query Conservation
Alig confidence																.	.													.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																.	.													.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	L	L	K	K	N	I	K	L	N	K	L	E	.	.	H	K	I	I	P	I	L	S	D	V	R	E	.	.	V	D	V	K	G	N	R	V	I	X	N	L	P	K	F	A	.	.	.	.	.	.	.	.	.	H	K	F	I	D	K	A	L	D	I	V	E	E	G	G	V	I	H	Y	Y	T	I	G	K	D
Template Known Secondary structure												T	T		T	.	.	T	T						S		G	G	G	.	.													T	T	T	G	.	.	.	.	.	.	.	.	.	G	G	G																					S	S
Template Predicted Secondary structure																.	.													.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270										.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		345	.	.			.	.	350	.	.	.	.	.					.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure					.	.									.	.	.	.							.	.
Query SS confidence					.	.									.	.	.	.							.	.
Query Sequence		D	Y	F	.	.	H	K	L	K	K	I	F	G	.	.	.	.	N	C	T	T	I	A	.	.	T	N	N	K	F	V	V	L	K	A	V	K	L	G	R	R
Query Conservation					.	.									.	.	.	.							.	.
Alig confidence					.	.									.	.	.	.							.	.
Template Conservation
Template Sequence		F	D	K	A	I	K	L	F	E	K	K	C	D	C	E	V	L	E	K	R	I	V	K	S	Y	A	P	R	E	Y	I	L	A	L	D	F	K	I	N	K	K
Template Known Secondary structure		S											S															T	T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions