Job Description P42596 Confidence 99.72% Date Thu Jan 5 12:01:41 GMT 2012 Rank 98 Aligned Residues 139 % Identity 16% Template c2yvlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of trna (m1a58) methyltransferase trmi from aquifex2 aeolicus Resolution 2.20 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		A	R	F	F	M	Q	H	L	P	E	N	L	E	G	E	I	V	D	L	G	C	G	N	G	V	I	G	L	T	L	L	D	K	N	P	Q	A	K	V	V	F	V	D	E	S	P	M	A	V	A	S	S	R	L	N	V	E	T	N	M	P	E	A	L	D	R	C	E	F	M	I	N	N	A	L	S	.	G	V	E
Query Conservation																																																																														.
Alig confidence																																			.	.																												.	.													.
Template Conservation																																			.	.																												.	.
Template Sequence		S	F	Y	I	A	L	K	L	N	L	N	K	E	K	R	V	L	E	F	G	T	G	S	G	A	L	L	A	V	L	S	E	V	.	.	A	G	E	V	W	T	F	E	A	V	E	E	F	Y	K	T	A	Q	K	N	L	K	K	F	N	L	G	.	.	K	N	V	K	F	F	N	V	D	F	K	D	A	E	V	P
Template Known Secondary structure									T	T			T	T									T	T	S										.	.	S	S							S	S														T	T			.	.	T	T						S		T	T	T	S
Template Predicted Secondary structure																																			.	.																												.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	R	F	N	A	V	L	C	N	P	P	F	H	Q	Q	H	A	L	T	D	N	V	A	W	E	M	F	H	H	A	R	R	C	L	K	I	N	G	E	L	Y	I	V	A	N	R	H	L	D	Y	F	H	K	L	K	K	I	F	G	N	C	T	T	I	A	T	N	N	K	F	V	V	L	K	A	V	K	L	G
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.																				.	.	.	.															.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																				.	.	.	.															.	.	.	.	.
Template Sequence		E	G	I	F	H	A	A	F	V	D	V	R	E	P	W	H	.	.	.	.	.	.	.	.	.	.	Y	L	E	K	V	H	K	S	L	M	E	G	A	P	V	G	F	L	L	.	.	.	.	P	T	A	N	Q	V	I	K	L	L	E	S	I	E	.	.	.	.	.	N	Y	F	G	N	L	E	V	V	E	I	L
Template Known Secondary structure		T	T		B	S						S	S		G	G	G	.	.	.	.	.	.	.	.	.	.	G								B		T	T								.	.	.	.	S	S												T	.	.	.	.	.	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																				.	.	.	.															.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.											.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.
		376	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	R	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		217	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions