Job Description P42596 Confidence 98.18% Date Thu Jan 5 12:01:41 GMT 2012 Rank 298 Aligned Residues 115 % Identity 18% Template c2wa1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:non-structural protein 5; PDBTitle: structure of the methyltransferase domain from modoc virus,2 a flavivirus with no known vector (nkv) Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	Q	H	L	P	E	N	L	E	G	E	I	V	D	L	G	C	G	N	G	V	I	G	L	T	L	L	D	K	N	P	Q	A	K	V	V	F	V	D	E	S	P	M	A	V	A	S	S	R	L	N	V	E	T	N	M	P	E	A	L	D	R	C	E	F	M	I	N	N	A	L	S	G	V	E	P	F	R	F
Query Conservation
Alig confidence																																														.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		I	D	E	R	G	G	V	E	L	K	G	T	V	V	D	L	G	C	G	R	G	S	W	S	Y	Y	A	A	S	Q	P	N	V	R	E	V	K	A	Y	T	L	G	T	S	.	.	.	.	G	H	E	K	P	R	L	V	E	T	F	G	W	N	L	I	T	F	K	S	K	V	D	V	T	K	M	E	P	F	Q	A
Template Known Secondary structure					T	T	S											T		T	T	S								T	S	T	T											S	T	.	.	.	.	T	S									T	T	G	G	G						S			T	T	T
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.
Predicted Secondary structure													.																					.	.
Query SS confidence													.																					.	.
Query Sequence		N	A	V	L	C	N	P	P	F	H	Q	.	Q	H	A	L	T	D	N	V	A	W	E	M	F	H	H	A	R	R	C	L	.	.	K	I	N	G	E	L	Y	I
Query Conservation													.																					.	.
Alig confidence													.																					.	.
Template Conservation
Template Sequence		D	T	V	L	C	D	I	G	E	S	N	P	T	A	A	V	E	A	S	R	T	L	T	V	L	N	V	I	S	R	W	L	E	Y	N	Q	G	C	G	F	C	V
Template Known Secondary structure		S											S	S																						S	T	T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions