Job Description P42596 Confidence 99.13% Date Thu Jan 5 12:01:41 GMT 2012 Rank 277 Aligned Residues 133 % Identity 17% Template c2plwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna methyltransferase, putative; PDBTitle: crystal structure of a ribosomal rna methyltransferase, putative, from2 plasmodium falciparum (pf13_0052). Resolution 1.70 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																									.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	E	G	E	I	V	D	L	G	C	G	N	G	V	I	G	L	T	L	L	D	K	.	.	N	P	Q	A	K	V	V	F	V	D	E	S	P	M	A	V	A	S	S	R	L	N	V	E	T	N	M	P	E	A	L	D	R	C	E	F	M	I	N	N	A	L	S	G	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	N	K	I	I	L	D	I	G	C	Y	P	G	S	W	C	Q	V	I	L	E	R	T	K	N	Y	K	N	K	I	I	G	I	D	K	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	P	I	P	N	V	Y	F	I	Q	G	E	I	G	K	D	N	M	N	N	I	N	S	V	D	Y	K
Template Known Secondary structure			T	T							S		T	T											T	T	T	S									S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T								T	T	T	T	S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.															.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
						294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.							.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure		.	.	.	.																				.	.	.	.	.	.																																					.	.	.
Query SS confidence		.	.	.	.																				.	.	.	.	.	.																																					.	.	.
Query Sequence		.	.	.	.	V	E	P	F	R	F	N	A	V	L	C	N	P	P	F	H	Q	Q	H	.	.	.	.	.	.	A	L	T	D	N	V	A	W	E	M	F	H	H	A	R	R	C	L	K	I	N	G	E	L	Y	I	V	A	N	R	H	L	D	Y	F	H	.	.	.	K	L	K	K	I	F	G	N	C	T	T	I
Query Conservation		.	.	.	.																				.	.	.	.	.	.																																					.	.	.
Alig confidence		.	.	.	.																				.	.	.	.	.	.																																					.	.	.
Template Conservation
Template Sequence		L	K	E	I	L	Q	D	K	K	I	D	I	I	L	S	D	A	A	V	P	C	I	G	N	K	I	D	D	H	L	N	S	C	E	L	T	L	S	I	T	H	F	M	E	Q	Y	I	N	I	G	G	T	Y	I	V	K	M	Y	L	G	S	Q	T	N	N	L	K	T	Y	L	K	G	M	F	Q	L	V	H	T	T
Template Known Secondary structure							T	T																S																																					S	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		361			.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		A	.	.	T	N	N	K	F	V	V	L	K	A	V	K
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		K	P	K	S	R	E	I	Y	L	V	C	K	N	F	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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