Job Description P42596 Confidence 98.58% Date Thu Jan 5 12:01:41 GMT 2012 Rank 288 Aligned Residues 132 % Identity 15% Template c2nyuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative ribosomal rna methyltransferase 2; PDBTitle: crystal structure of human ftsj homolog 2 (e.coli) protein2 in complex with s-adenosylmethionine Resolution 1.76 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.										.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																																				.							.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.																																				.							.	.	.	.
Query Sequence		N	L	E	G	E	I	V	D	L	G	C	G	N	G	V	I	G	L	T	L	L	D	K	N	P	.	.	.	.	.	.	.	.	.	Q	A	K	V	V	F	V	D	E	S	P	M	A	V	A	S	S	R	L	N	V	E	T	N	M	P	E	A	L	D	R	C	E	F	M	.	I	N	N	A	L	S	.	.	.	.
Query Conservation																											.	.	.	.	.	.	.	.	.																																				.							.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.											.							.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	G	L	R	V	L	D	C	G	A	A	P	G	A	W	S	Q	V	A	V	Q	K	V	N	A	A	G	T	D	P	S	S	P	V	G	F	V	L	G	V	D	L	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	P	L	E	G	A	T	F	L	C	P	A	D	V	T	D	P	R	T	S
Template Known Secondary structure			T	T							T			S											T	T	T	T				T	T	S										S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T						S			T	T	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.															.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
							293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.							.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.				350	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																										.	.	.	.	.	.																																	.	.	.
Query SS confidence		.	.	.	.	.																										.	.	.	.	.	.																																	.	.	.
Query Sequence		.	.	.	.	.	G	V	E	P	F	R	F	N	A	V	L	C	N	P	P	F	H	Q	Q	H	A	L	T	D	N	.	.	.	.	.	.	V	A	W	E	M	F	H	H	A	R	R	C	L	K	I	N	G	E	L	Y	I	V	A	N	R	H	L	D	Y	F	H	K	.	.	.	L	K	K	I	F	G	N	C	T
Query Conservation		.	.	.	.	.																										.	.	.	.	.	.																																	.	.	.
Alig confidence		.	.	.	.	.																										.	.	.	.	.	.																																	.	.	.
Template Conservation
Template Sequence		Q	R	I	L	E	V	L	P	G	R	R	A	D	V	I	L	S	D	M	A	P	N	A	T	G	F	R	D	L	D	H	D	R	L	I	S	L	C	L	T	L	L	S	V	T	P	D	I	L	Q	P	G	G	T	F	L	C	K	T	W	A	G	S	Q	S	R	R	L	Q	R	R	L	T	E	E	F	Q	N	V	R
Template Known Secondary structure								S	G	G	G															S																																					S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	A	T	N	N	K	F	V	V	L	K	A	V	K
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		I	I	K	P	.	E	V	Y	F	L	A	T	Q	Y	H
Template Known Secondary structure						.
Template Predicted Secondary structure						.
Template SS confidence
		167	.	.	170		.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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