Job Description P42596 Confidence 89.36% Date Thu Jan 5 12:01:41 GMT 2012 Rank 364 Aligned Residues 109 % Identity 15% Template c2g5cD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from aquifex aeolicus Resolution 1.90 Å

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		229	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		E	G	E	I	V	D	L	G	C	G	N	.	.	G	V	I	G	L	T	L	L	D	K	N	P	Q	A	K	V	V	F	V	D	E	S	P	M	A	V	A	S	S	R	L	N	V	E	T	N	M	P	E	A	L	D	R	C	E	F	M	I	N	N	A	L	S	G	V	E	P	F	R	F	N	A	V	L	C	N	P
Query Conservation													.	.
Alig confidence													.	.																																.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		X	Q	N	V	L	I	V	G	V	G	F	X	G	G	S	F	A	K	S	L	R	R	S	G	F	K	G	K	I	Y	G	Y	D	I	N	P	E	S	I	S	K	A	V	D	.	.	.	.	.	.	.	.	.	.	L	G	I	I	D	E	G	T	T	S	I	A	K	V	E	D	F	S	P	D	F	V	X	L	S	.
Template Known Secondary structure									S		S													T	T			S							S											.	.	.	.	.	.	.	.	.	.	T	T	S		S				S		G	G	G	G	G	G	G			S						.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.											.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	H	Q	Q	H	A	L	T	D	N	V	A	W	E	M	F	H	H	A	R	R	C	L	K	I	N	G	E	L	Y	I	V	A	N	R	H	L	D	Y	F	H	K	L	K	K	I	F	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	S	P	V	R	T	F	R	E	I	A	K	K	L	S	Y	I	L	S	E	D	A	T	V	T	D	Q	G	S	V	K	G	K	L	V	Y	D	L	E	N	I	L	G
Template Known Secondary structure		.	.	.	.	.	.	.	S		G	G	G												S		T	T								S			T											G
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions