Job Description P42596 Confidence 91.42% Date Thu Jan 5 12:01:41 GMT 2012 Rank 355 Aligned Residues 147 % Identity 14% Template c2g1pB_ PDB info PDB header:transferase/dna Chain: B: PDB Molecule:dna adenine methylase; PDBTitle: structure of e. coli dna adenine methyltransferase (dam) Resolution 1.89 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.											270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query Sequence		A	R	F	F	M	Q	H	L	P	E	N	L	E	G	E	I	V	D	L	G	C	G	N	G	V	I	G	L	T	L	L	D	K	N	P	Q	A	K	V	V	F	V	D	E	S	P	M	A	V	A	S	S	R	.	.	.	.	.	.	.	.	.	.	L	N	V	E	T	N	M	P	E	A	L	D	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Alig confidence											.	.																		.	.	.	.																						.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation											.	.																		.	.	.	.
Template Sequence		L	D	D	I	K	R	H	L	P	.	.	K	G	E	C	L	V	E	P	F	V	G	A	G	S	V	F	L	.	.	.	.	N	T	D	F	S	R	Y	I	L	A	D	I	N	S	D	L	I	S	L	Y	N	I	V	K	M	R	T	D	E	Y	V	Q	A	A	R	E	L	F	V	P	E	T	N	C	A	E	V	Y
Template Known Secondary structure											.	.			S					T	T		T	T						.	.	.	.	T				S							S																								T	T	S	S	G	G	G		S
Template Predicted Secondary structure											.	.																		.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
																																																																			282	.	.	.	.	.	.	.	290	.	.	.	.		.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	C	E	F	M	I	N	N	A	L	S	G	V	.	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		Y	Q	F	R	E	E	F	N	K	S	Q	D	P	F	R	R	A	V	L	F	L	Y	L	N	R	Y	G	Y	N	G	L	C	R	Y	N	L	R	G	E	F	N	V	P	F	G	R	Y	K	K	P	Y	F	P	E	A	E	L	Y	H	F	A	E	K	A	Q	N	A	F	F	Y	C	E	S	Y	A	D	S	M	A	R
Template Known Secondary structure																												B	G	G	G				B		T	T	S		B				B				S	S															G	G	G													T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	R	F	N	A	V	L	C	N	P	P	F	H	Q	Q	H	A	L	T	D	N	V	A	W	E	M	F	H	H	A	R	R	C	L	K	I	N	G	E	L	Y	I	V	A	N	R	H	L	D	Y	F	H	K	L	K	K	I	F	G	N	C	T	T	I	A	T	N	N	K	F	V	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	D	S	S	V	V	Y	C	D	P	P	Y	A	P	L	T	N	S	F	T	L	E	Q	Q	A	H	L	A	E	I	A	E	G	L	V	E	R	H	I	P	V	L	I	S	N	H	D	T	M	L	T	R	E	W	Y	Q	R	A	K	L	H	V	V	K	V	K	V	D	E	L	L	A	L
Template Known Secondary structure				T	T								S							S																			T	T																	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions