Return to main results Retrieve Phyre Job Id

Job DescriptionP42596
Confidence55.62%DateThu Jan 5 12:01:41 GMT 2012
Rank430Aligned Residues102
% Identity11%Templatec2d3tB_
PDB info PDB header:lyase, oxidoreductase/transferaseChain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   225....230.........240.........250.........260.........270........ .280.........290
Predicted Secondary structure 




















..............





Query SS confidence 





















































. . . . . . . . . . . . . .











Query Sequence  PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE. . . . . . . . . . . . . . ALDRCEFMINNA
Query Conservation 
     







 
 
   

   
   
  

 
  

  
  
   
   ..............    
     
 
Alig confidence 





















































..............











Template Conservation      
  
 




 

  

   
 

  
 
 
     
      
          
             
       
Template Sequence  IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYG
Template Known Secondary structure  T



SS

TTTT


SSTTTSS

SSGG
Template Predicted Secondary structure 


























Template SS confidence 















































































   310.........320.........330.........340.........350.........360.........370.........380.........
 
   291........300.........310.........320.........330......
Predicted Secondary structure 




















Query SS confidence 













































Query Sequence  LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL
Query Conservation          

 

 




             
  
 
 




 
Alig confidence  ....












......






















Template Conservation  .... 
   






 ......
 
  
      
        

Template Sequence  . . . . DFGNVDLVVEAVV. . . . . . ENPKVKQAVLAEVENHVREDAIL
Template Known Secondary structure  ....GGGG
S


......S
TTTS
SS
Template Predicted Secondary structure  ....





......





Template SS confidence 













































   390.........400.. .......410.........420.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions