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Job Description | P42596 | Confidence | 43.05% | Date | Thu Jan 5 12:01:41 GMT 2012 |
Rank | 461 | Aligned Residues | 99 |
% Identity | 12% | Template | c1z82A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; |
PDBTitle: crystal structure of glycerol-3-phosphate dehydrogenase (tm0378) from2 thermotoga maritima at 2.00 a resolution
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Resolution | 2.00 Å |
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229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
E | G | E | I | V | D | L | G | C | G | N | G | V | I | G | L | T | L | L | D | K | N | P | Q | A | K | V | V | F | V | D | E | S | P | M | A | V | A | S | S | R | L | N | V | E | T | N | M | P | E | A | L | D | R | C | E | F | M | I | N | N | A | L | S | G | V | E | P | F | R | F | N | A | V | L | C | N | P | P | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | X | R | F | F | V | L | G | A | G | S | W | G | T | V | F | A | Q | X | L | H | E | N | G | E | E | V | I | L | W | A | R | R | K | E | I | V | D | L | I | N | V | S | . |
H | T | S | P | Y | V | E | E | S | K | I | T | V | R | A | T | N | D | L | E | E | I | K | K | . |
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E | D | I | L | V | I | A | I | P | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
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. | 70 | . | . | . | . | . | . | . | . |
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309 | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
H | Q | Q | H | A | L | T | D | N | V | A | W | E | M | F | H | H | A | R | R | C | L | K | I | N | G | E | L | Y | I | V | A | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | Y | . |
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I | R | E | H | L | L | R | L | P | V | K | P | S | X | V | L | N | L | S | K |
Template Known Secondary structure |   |
G | G | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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79 | 80 | |
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. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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