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Job DescriptionP42596
Confidence99.61%DateThu Jan 5 12:01:41 GMT 2012
Rank183Aligned Residues143
% Identity15%Templatec1tw3A_
PDB info PDB header:transferaseChain: A: PDB Molecule:carminomycin 4-o-methyltransferase; PDBTitle: crystal structure of carminomycin-4-o-methyltransferase2 (dnrk) in complex with s-adenosyl-l-homocystein (sah) and3 4-methoxy-e-rhodomycin t (m-et)
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   218.220.........230.........240.........250.........260.........270.........280.........290.......
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Query Sequence  RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF
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Template Sequence  DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAG. TVDTARSYLKDEGLS. . DRVDVVEGDFFEPLP. R
Template Known Secondary structure  S

TT
ST
TTS
TT

TT.TT
T..TT

TTS

S.S
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   168.170.........180.........190.........200.........210.. .......220....... ..230.........240.. .
 
   298.300.........310.........320.........330.........340 .........350...
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Query Sequence  RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA. . . . . . . . . . . . . . . . . . . . . . . . NRHLDYFHKLKKI
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Template Sequence  KADAIILSFVLLN. . . WPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGL
Template Known Secondary structure 
S
GGG...S
T

B
GGG

SS



B
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   244.....250...... ...260.........270.........280.........290.........300.........310.........320
 
   354.....360.........370....
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Query Sequence  FGNCTTIATNNKFVVLKAVKL
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Template Sequence  A. . . . . . . ASAGLVVEEVRQL
Template Known Secondary structure  .......TT
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   321 ........330....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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