 |
Job Description | P42596 | Confidence | 41.63% | Date | Thu Jan 5 12:01:41 GMT 2012 |
Rank | 462 | Aligned Residues | 89 |
% Identity | 11% | Template | c1luaA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:methylene tetrahydromethanopterin dehydrogenase; |
PDBTitle: structure of methylene-tetrahydromethanopterin dehydrogenase from2 methylobacterium extorquens am1 complexed with nadp
|
Resolution | 1.90 Å |
|
 |
  |   |
218 | . | 220 | . | . | . | . | . | |
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | |
. | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | F | M | Q | H | L | P | . |
E | N | L | E | G | E | I | V | D | L | G | C | G | N | G | V | . |
I | G | L | T | L | L | D | K | N | P | Q | A | K | V | V | F | V | D | E | S | P | M | A | V | A | S | S | R | L | N | V | E | T | N | M | P | E | A | L | D | R | C | E | F | M | I | N | N | A | L | S | G | V | E |
Query Conservation |   |
|   |
|
|   |   |
|
| . |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   | . |
|   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|   |
|
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
A | L | V | V | K | A | A | G | G | S | V | K | G | K | K | A | V | V | L | A | G | T | G | P | V | G | M | R | S | A | A | L | L | A | G | E | G | A | E | V | V | L | C | G | R | K | L | D | K | A | Q | A | A | A | D | S | V | N | K | R | F | K | V | N | V | T | A | A | E | T | A | D | D | A | S | R | A | E | A | V |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | S |
|
| T | T |
|  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |
|
| S |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
  |
  |   |
296 | . | . | . | 300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | F | R | F | N | A | V | L | C | N | P | P |
Query Conservation |   |
  |   |   |
|
|   |
|
|   |
|
|
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |   |   |
|
|
|
|   |   |
|   |
Template Sequence |   |
. |
K | G | A | H | F | V | F | T | A | G | A |
Template Known Secondary structure |   |
. | T | T |
| S |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
. |
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
188 | . | 190 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|