Job Description P75867 Confidence 84.85% Date Thu Jan 5 12:15:15 GMT 2012 Rank 27 Aligned Residues 165 % Identity 12% Template c3pfiB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb; PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate Resolution 2.69 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		F	N	G	D	I	T	L	Q	P	G	L	V	H	Q	A	N	G	G	I	L	I	I	S	L	R	T	L	L	A	Q	P	L	L	W	M	.	R	L	K	N	I	V	N	R	E	R	F	D	W	V	A	F	D	E	S	R	P	L	P	V	S	V	P	S	M	P	L	K	L	K	V	I	L	V	G	E	R	E	S	L
Query Conservation																																					.
Alig confidence						.	.	.	.																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	S	G	P	.	.	.	.	A	G	L	G	K	T	T	L	A	N	I	I	S	Y	E	X	S	A	N	I	K	T	T	A	A	P	X	I	E	K	S	G	D	L	A	A	I	L	T	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	G	D	I	L	F	I	D	E	I	H	R	L
Template Known Secondary structure				S	S	.	.	.	.	T	T	S	S												T	T								G	G	G			S	S									T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T							S	G	G	G
Template Predicted Secondary structure						.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																		.	.	.	.	.	.	.	.	110	.	.	.	.	.
																										214	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	F	Q	E	M	E	P	E	L	S	E	.	Q	A	I	Y	S	E	F	E	D	T	L	Q	I	V	D	A	E	S	V	T	Q	W	C	R	W	V	T	F	T	A	R	H	N	H	L	P	A	P	G	A	D	A	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																.	.	.	.	.	.	.															.
Template Conservation																																																						.	.	.	.	.	.	.															.
Template Sequence		S	P	A	I	E	E	V	L	Y	P	A	X	E	D	Y	P	K	F	T	L	I	G	A	T	T	R	A	G	X	L	S	N	P	L	R	D	R	F	G	X	Q	F	R	L	E	F	Y	K	D	S	E	L	.	.	.	.	.	.	.	A	L	I	L	Q	K	A	A	L	K	L	N	K	T	.	C	E	E	K	A	A
Template Known Secondary structure															T											S		G	G	G	S						T	T		S														.	.	.	.	.	.	.											T	T			.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.															.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	L	I	R	E	A	A	R	Y	T	G	E	Q	E	T	L	P	L	S	P	Q	W	I	L	R	Q	C	K	E	V	A	S	L	C	D	G	D	T	F	S	G	E	Q	L	N	L	M	L	Q	Q	R	E	W	R	E	G	F	L	A	E	R	M	Q	D	E	I
Query Conservation
Alig confidence															.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.
Template Sequence		L	E	I	A	K	R	S	R	S	T	P	R	I	.	.	.	.	.	.	.	A	L	R	L	L	K	R	V	R	D	F	A	D	V	N	D	E	E	I	I	T	E	K	R	A	N	E	A	L	N	S	L	G	V	N	E	L	G	F	D	A	X	D	L	R	Y	L
Template Known Secondary structure								T	T	T					.	.	.	.	.	.	.															T	T		S															T			T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions