 |
Job Description | P75867 | Confidence | 14.98% | Date | Thu Jan 5 12:15:15 GMT 2012 |
Rank | 98 | Aligned Residues | 34 |
% Identity | 18% | Template | c3hrdE_ |
PDB info |
PDB header:oxidoreductase | Chain: E: PDB Molecule:nicotinate dehydrogenase large molybdopterin |
PDBTitle: crystal structure of nicotinate dehydrogenase
|
Resolution | 2.20 Å |
|
  |   |
422 | . | . | . | . | . | . | . | |
|
|
430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | S | L | T | F | E | Q | . |
. |
. |
S | Y | S | E | V | D | G | D | S | A | S | M | A | E | L | C | A | L | I | S | A | L | A | D | V | P | V | N |
Query Conservation |   |
  |   |
|
|   |
|   |
| . | . | . |
|   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|
|
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |   | . | . |   |   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|
Template Sequence |   |
K | V | R | I | I | Q | A | T | T | G | G | G | F | G | G | K | L | D | L | S | V | . |
. |
Q | C | H | C | A | L | L | T | Y | H | T | K | K | P | V | K |
Template Known Secondary structure |   |
G |  |  |  |  |  |
| B |
|
|
|
| T | T | T | T | S | S |
| S | S | . | . |  |  |  |  |  |  |  |  |  |  |  |
| S |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | |
|
. | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|