Job Description P75867 Confidence 87.97% Date Thu Jan 5 12:15:15 GMT 2012 Rank 25 Aligned Residues 71 % Identity 14% Template c3co5B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative two-component system transcriptional response PDBTitle: crystal structure of sigma-54 interaction domain of putative2 transcriptional response regulator from neisseria gonorrhoeae Resolution 2.40 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	V	S	G	H	S	I	R	L	R	H	A	V	S	A	D	D	N	F	A	T	L	T	Q	V	V	A	A	D	W	V	E	A	E	Q	L	F	G	C	L	R	Q	F	N	G	D	I	T	L	Q	P	G	L	V	H	Q	A	N	G	G	I	L	I	I	S	L	R	T	L	L	A	Q	P	L	L	W	M	R	L
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																					.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																					.
Template Sequence		T	G	E	A	G	S	P	F	E	T	V	A	R	Y	F	H	K	N	G	T	P	W	V	S	P	A	.	.	.	.	.	.	.	.	.	.	.	.	R	V	E	Y	L	I	D	X	P	.	.	.	.	X	E	L	L	Q	K	A	E	G	G	V	L	Y	V	G	D	I	A	Q	Y	.	S	R	N	I	Q	T	G	I
Template Known Secondary structure					T	T									T	T			T	T	S						S	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T							.	.	.	.							T	T	T	S								T	T		.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																					.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.													.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.
		172	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	I	V	N	R	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	I	I	G	K	A	E
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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