Job Description P75867 Confidence 82.73% Date Thu Jan 5 12:15:15 GMT 2012 Rank 28 Aligned Residues 155 % Identity 15% Template c3b9pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		F	N	G	D	I	T	L	Q	P	G	L	V	H	Q	A	N	G	G	I	L	I	I	S	L	R	T	L	L	A	Q	P	L	L	W	M	R	L	K	N	I	V	N	R	E	R	F	D	W	V	A	F	D	E	S	R	P	L	P	V	S	V	P	S	M	P	L	K	L	K	V	I	L	V	G	E	R	E	S	L	.
Query Conservation																																																																																	.
Alig confidence						.	.	.	.																										.	.	.	.	.	.	.	.																																							.
Template Conservation						.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		L	F	G	P	.	.	.	.	P	G	N	G	K	T	L	L	A	R	A	V	A	T	E	C	S	A	T	F	L	N	I	S	A	.	.	.	.	.	.	.	.	A	S	L	T	S	K	Y	V	G	D	G	E	K	L	V	R	A	L	F	A	V	A	R	H	M	Q	P	S	I	I	F	I	D	E	V	D	S	L	L
Template Known Secondary structure				S	S	.	.	.	.	S	S	S													T	T								S	.	.	.	.	.	.	.	.	T	T	T	S	S	S	S		S																T		S							T	G	G	G	T	S
Template Predicted Secondary structure						.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		521	.	.	.					.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.									550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
																															214	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	F	Q	E	M	E	P	E	L	S	E	.	Q	A	I	Y	S	E	F	E	D	T	L	Q	I	V	D	A	E	S	V	T	Q	W	C	R	W	V	T	F	T	A	R	H	N	H	L	P	A	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.															.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.
Template Sequence		S	E	R	E	A	S	R	R	L	K	T	E	F	L	V	E	F	D	G	L	P	R	I	V	V	L	A	A	T	N	R	P	Q	E	L	D	E	A	A	L	R	R	F	T	K	R	V	Y	V	S	L	P	D	E	Q	T	.	.	.	.	.	.	.	.	R	E	L	L	L	N	R	L	L	Q	K	Q	G	S	P	L
Template Known Secondary structure		B					S																								S		G	G	G	B																						.	.	.	.	.	.	.	.										G	G	G	S			S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Template SS confidence
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.									.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.								.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.
Query Sequence		G	A	D	A	W	P	I	L	I	R	E	A	A	R	Y	T	G	E	Q	E	T	L	P	L	S	P	Q	W	I	L	R	Q	C	K	E	V	A	S	L	C	.	.	.	.	.	.	.	D	G	D	T	F	S	G	E	Q	L	N	L	M	L	Q
Query Conservation																																										.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.
Template Sequence		D	T	E	A	L	R	R	L	A	K	I	T	D	G	Y	S	.	.	.	.	.	.	.	.	.	G	S	D	L	T	A	L	A	K	D	A	A	L	E	P	I	R	E	L	N	I	S	A	M	R	A	I	T	E	Q	D	F	H	S	S	L	K
Template Known Secondary structure													T	T	T			.	.	.	.	.	.	.	.	.												T	T					T																		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.										.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions