Job Description P75867 Confidence 61.48% Date Thu Jan 5 12:15:15 GMT 2012 Rank 45 Aligned Residues 163 % Identity 13% Template c2x8aA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:nuclear valosin-containing protein-like; PDBTitle: human nuclear valosin containing protein like (nvl), c-2 terminal aaa-atpase domain Resolution 2.60 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		F	N	G	D	I	T	L	Q	P	G	L	V	H	Q	A	N	G	G	I	L	I	I	S	L	R	T	L	L	A	Q	P	L	L	W	M	R	L	K	N	I	V	N	R	E	R	F	D	W	V	A	F	D	E	S	R	P	L	P	V	S	V	P	S	M	P	L	K	L	K	V	I	L	V	G	E	R	E	S	L	.
Query Conservation																																																																																	.
Alig confidence						.	.	.	.																										.	.	.	.	.	.	.	.																																							.
Template Conservation						.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		L	A	G	P	.	.	.	.	P	G	C	G	K	T	L	L	A	K	A	V	A	N	E	S	G	L	N	F	I	S	V	K	G	.	.	.	.	.	.	.	.	P	E	L	L	N	M	Y	V	G	E	S	E	R	A	V	R	Q	V	F	Q	R	A	K	N	S	A	P	C	V	I	F	F	D	E	V	D	A	L	C
Template Known Secondary structure				S	S	.	.	.	.	T	T	S													T	T								T	.	.	.	.	.	.	.	.	T	T	T		S	S	T	T																	T		S							T		T	T	T
Template Predicted Secondary structure						.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		620	.	.	.					.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.									.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
																														214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	F	Q	E	M	E	P	E	L	S	E	Q	A	I	Y	S	E	F	E	D	T	L	Q	I	V	D	A	E	S	V	T	Q	W	C	R	W	V	T	F	T	A	R	H	N	H	L	P	A	P	G	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																													.	.	.
Template Sequence		P	S	V	R	V	V	N	Q	L	L	T	E	M	D	G	L	E	A	R	Q	Q	V	F	I	M	A	A	T	N	R	P	D	I	I	D	P	A	I	L	R	P	G	R	.	.	.	L	D	K	T	L	F	V	G	L	P	P	P	A	D	R	L	A	I	L	K	T	I	T	K	N	G	T	K	P	P	L	D	A	D
Template Known Secondary structure				T	T											T			S	T	T									S		G	G	G	S						S	T	T	S	.	.	.	S								S														T	T	T	T	B	T	T	B	B		T	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		688	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730				.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.				.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		D	A	W	P	I	L	I	R	E	A	A	R	Y	T	G	E	Q	E	T	L	P	L	S	P	Q	W	I	L	R	Q	C	K	E	V	A	S	L	C	.	.	.	D	G	D	T	F	S	G	E	Q	L	N	L	M	L	Q	Q
Query Conservation																																								.	.	.
Alig confidence								.	.									.	.	.	.	.																		.	.	.
Template Conservation								.	.									.	.	.	.	.
Template Sequence		V	N	L	E	A	I	.	.	A	G	D	L	R	C	D	C	.	.	.	.	.	Y	T	G	A	D	L	S	A	L	V	R	E	A	S	I	C	A	L	R	Q	E	M	L	K	V	S	H	K	H	F	E	E	A	F	K	K
Template Known Secondary structure								.	.		T		S	G	G	G	S	.	.	.	.	.																									B										T	T
Template Predicted Secondary structure								.	.									.	.	.	.	.
Template SS confidence
		774	.	.	.	.	.			780	.	.	.	.	.	.	.						.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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