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Job DescriptionP75867
Confidence21.87%DateThu Jan 5 12:15:15 GMT 2012
Rank73Aligned Residues166
% Identity12%Templatec2qz4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160....... ..170.........180.........190........
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Query Sequence  FNGDITLQPGLVHQANGGILIISLRTLLAQPLL. . . . . . . WMRLKNIVNRERFDWVAFDESRPLPVSVPSM. . . . . . . . .
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Template Sequence  LLGP. . . . PGCGKTLLAKAVATEAQVPFLAMAGAEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIEQTLNQLLVEMD
Template Known Secondary structure  S
....TTSST

TTTTSSSSTTT
S


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   347..350 .........360.........370.........380.........390.........400.........410.........420..
 
   199200.........210.........220.........230.........240.........250.........260.........270....
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Query Sequence  . . . . PLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVDAESVTQWCRWVTFTARHNHLPAPGADAWPILIRE
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Template Sequence  GMGTTDHVIVLASTN. . . . . RADILDGALMRPGR. . . LDRHVFID. LPTLQERREIFEQHLKSLKLTQSSTFYSQRLAEL
Template Known Secondary structure  T

TT

S.....
GGGGGSGGGSTTS...



.S

TT

BTT
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   442.......450...... ...460.........470 ........ .480.........490.........500.........510..
 
   275....280.........290.........300.........310.........320...
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Query Sequence  AARYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQREWR
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Template Sequence  TPGFS. . . . . . . . . GADIANICNEAALHVHTLNF. EYAVERVLAGTAKK
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B

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   513.... ..520.........530....... ..540.........550.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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