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Job DescriptionP75867
Confidence82.54%DateThu Jan 5 12:15:15 GMT 2012
Rank29Aligned Residues134
% Identity13%Templatec1sxjA_
PDB info PDB header:replicationChain: A: PDB Molecule:activator 1 95 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160......... 170.........180.........190.........200.........
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Query Sequence  CLRQFNGDITLQPGLVHQANGGILIISLRTLLAQPLLWM. RLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGE
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Template Sequence  RAAMLYGP. . . . PGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGY. FKHQNLNGKHFVIIMDE
Template Known Secondary structure  S
S....TTSSTT

TTS


TGGGGTT


STTT.TT


SSTTS
S
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   347..350.... .....360.........370.........380.........390.........400.... .....410.........420.
 
   210... ......220.........230.........240.........250.........260..
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Query Sequence  RESL. . . . . . . . . . . . . . . . . . . . . . . . . . . ADFQEMEPELSEQAIYSEFEDTLQIVDAESVTQWCRWVTFTARHNHLPA
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Template Sequence  VDGMSGGDRGGVGQLAQFCRKTSTPLILICNERNLPKMRPFDRVCLDIQFRRPDANSI. . . . . . . KSRLMTIAIREKF. K
Template Known Secondary structure  GGG

TTSTT
SS
S
TTSSTTGGGTTTS




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   426...430.........440.........450.........460.........470.........480... ......490...... .
 
   263......270.......
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Query Sequence  PGADAWPILIREAAR
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Template Sequence  LDPNVIDRLIQTTRG
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TTTTT
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   498.500.........510..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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