Return to main results Retrieve Phyre Job Id

Job DescriptionP75867
Confidence96.82%DateThu Jan 5 12:15:15 GMT 2012
Rank15Aligned Residues176
% Identity14%Templatec1qvrB_
PDB info PDB header:chaperoneChain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150......... 160.........170.........180.........190.........200.........210.
Predicted Secondary structure 












...
























Query SS confidence 
























. . .



















































Query Sequence  FNGDITLQPGLVHQANGGILIISLR. . . TLLAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERE
Query Conservation   

      
    
 

 
     ... 

    
   


 

  
 
                      





  
Alig confidence 



....
















...









............





























Template Conservation 
 

....





 





  
       
  



............         
 
 
  
  
  

 




Template Sequence  FLGP. . . . TGVGKTELAKTLAATLFDTEEAMIRIDMTE. . . . . . . . . . . . YMEKHAVSRLQLTEAVRRRPYSVILFDEIE
Template Known Secondary structure  BSS....SSSSSSGGG
TTT............

SSGGGGG


SSSSGG
Template Predicted Secondary structure 

....









............









Template SS confidence 















































































   593... ...600.........610.........620...... ...630.........640.........650......
 
   212.......220..... ....230.........240.........250...... ...260....
Predicted Secondary structure 


.










..........................






Query SS confidence 













.






























. . . . . . . . . . . . . . . . . . . . . . . . . .







Query Sequence  SLADFQEMEPELSE. QAIYSEFEDTLQIVDAESVTQWCRWVTFTAR. . . . . . . . . . . . . . . . . . . . . . . . . . HNHLPAPG
Query Conservation      
   

    .     
        
          
     ..........................   
    
Alig confidence 
......






.






























..........................







Template Conservation 
......
   
   

  

 
 
 
  
      
 


 


                              
 
  
Template Sequence  K. . . . . . AHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEF
Template Known Secondary structure  G......S
TTT

SSS


TT

TTTT

TTTS
Template Predicted Secondary structure  ......

























Template SS confidence 















































































   671 ........680.........690.........700.........710.........720.........730.........740....
 
   265... .270.........280.........290. ........300.........310.........320........ .330.......
Predicted Secondary structure  .




..










..
Query SS confidence 



.






















. .




































. .








Query Sequence  ADAW. PILIREAARYTGEQETLPLSPQW. . ILRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLA. . ERMQDEILQ
Query Conservation      .  

    
              ..
   
 

        
    
   
     
   
 ..

    
 
Alig confidence 



.


..

















..









...























..








Template Conservation    
 
 

.. 
  
       
    
            ...           
         


 
   
   
 
Template Sequence  LNRLDEIV. . VFRPLTKEQIRQIVEIQLSYLRARLAEKRI. . . SLELTEAAKDFLAERGYDPVFGARPLRRVIQRELE
Template Known Secondary structure  T
SB

..B




TTT
...

BTTTBTST
Template Predicted Secondary structure 

..







...









Template SS confidence 













































































   745....750.. .......760.........770.........780.. .......790.........800.........810.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions