Job Description P07395 Confidence 99.80% Date Thu Jan 5 11:00:19 GMT 2012 Rank 26 Aligned Residues 204 % Identity 22% Template d1jjca_ SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.60

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		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.																	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	P	D	E	P	V	Q	A	S	L	I	M	G	T	H	R	E	A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	Q	M	I	H	P	G	V	E	A	L	L	L	P	S	P
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	D	V	S	L	P	G	A	S	L	F	S	G	G	L	H	P	I	T	L	M	E	R	E	L	V	E	I	F	R	A	L	G	Y	Q	A	V	E	G	P	E	V	E	S	E	F	F	N	F	D	A	L	N	I	P	E	H	H	P	A	R	D	M	W	D	T	F	W	L	T	G	E	G	F	R	L	E	G	P
Template Known Secondary structure					T	T	S																										T	T	T								S								T	G	G	G	T			T	T	S	G	G	G	G	G	S				B				S	S						T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		537	.	.	540	.	.				.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		I	S	V	E	M	S	.	.	.	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	Q	N	R	Q	Q	N	R	V	R	I	F	E	S	G	L	R	F	V	P	D	T	Q	A	P	L	G	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D
Query Conservation								.	.	.
Alig confidence								.	.	.																	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	E	E	V	E	G	R	L	L	L	R	T	H	T	S	P	M	Q	V	R	Y	M	V	A	.	.	.	.	H	T	P	P	F	R	I	V	V	P	G	R	V	F	R	F	E	Q	T	D	A	T	H	E	A	V	F	H	Q	L	E	G	L	V	V	G	.	.	.	.	.	.	.	.	.	.	.	E	G	I	A
Template Known Secondary structure		T	S					S						S	S	S	T										.	.	.	.	S		S	S													S				S	S			S												.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																											.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.												.	.	.	.
		614	.	.	.	.	.	620	.	.	.	.	.	.	.	.		.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.			.	.	.			.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Predicted Secondary structure																	.																											.	.				.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																											.	.				.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	D	L	K	G	D	L	E	S	V	L	D	L	T	.	G	K	L	N	E	V	E	F	R	A	E	A	N	P	A	L	H	P	G	Q	S	A	A	I	Y	L	.	.	K	G	E	.	.	R	I	G	F	V	G	V	V	H	P	E	L	E	R	K	L	D	L	N	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.																											.	.				.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																											.	.				.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	H	L	K	G	A	I	Y	E	L	A	Q	A	L	F	G	P	D	S	K	V	R	F	Q	P	V	Y	F	P	F	V	E	P	G	A	Q	F	A	V	W	W	P	E	G	G	K	W	L	E	L	G	G	A	G	M	V	H	P	K	V	F	Q	A	V	D	A	Y	R	E	R	L	G	L	P	P	A	Y	R	G
Template Known Secondary structure																			T	T											T	T												G	G	G	T																									T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	T	L	V	F	E	L	E	W	N	K	L	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	G	F	A	F	G	L	G	V	E	R	L	A	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions