 |
Job Description | P07395 | Confidence | 96.33% | Date | Thu Jan 5 11:00:19 GMT 2012 |
Rank | 58 | Aligned Residues | 114 |
% Identity | 15% | Template | d1b8aa2 |
SCOP info | Class II aaRS and biotin synthetases
| Class II aaRS and biotin synthetases
| Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
|
Resolution | 1.90 |
|
 |
  |   |
491 | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | L | S | L | K | R | V | K | T | L | L | N | D | K | G | Y | Q | E | V | I | T | Y | S | F | V | D | P | K | V | Q | Q | M | I | H | P | G | V | E | A | L | L | L | P | S | P | I | S | V | E | M | S | A | M | R | L | S | L | W | T | G | L | L | A | T | V | V | Y | N | Q | N | R | Q | Q | N | R | V | R | I | F |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|   |
|   |
|
|   |
|
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |
|
|   |
|
|   |   |   |
|
|   |
|
|   |
|
|   |
|   |   |   | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |
|   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   | . | . | . | . | . | . |
|
|
|
Template Sequence |   |
R | S | S | V | F | K | A | V | R | D | F | F | H | E | N | G | F | I | E | I | H | T | P | K | I | I | A | T | . |
. |
. |
. |
A | T | E | G | G | T | E | L | F | P | M | K | Y | F | E | E | D | . |
. |
A | F | L | A | E | S | P | Q | L | Y | K | E | I | M | M | A | S | G | L | D | . |
. |
. |
. |
. |
. |
R | V | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|
|
|
| S |  |  | S |
| . | . | . | . |
|
| S | S | S | S | S |
|
|  |  |  |  | T | T |  |  | . | . |  |  |  |
| S |
| S |  |  |  |  |  |  | G | G | G | T | T |
|
| . | . | . | . | . | . |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |
|
| . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
|
|
|
. | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
|
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
|
|
|
. | . | . |
  |
  |   |
571 | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | |
. | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | S | G | L | R | F | V | P | D | T | Q | A | P | L | G | . |
I | R | Q | D | L | M | L | A | G | V | I | C | G | N | R | Y | E | E | H | W | N | L | A | K | E | T | V | D | F | Y | D | L | K | G | D | L | E | S | V | L | D | L | T |
Query Conservation |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   | . |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |
|   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |
Template Sequence |   |
E | I | A | P | I | F | R | A | E | E | H | N | T | T | R | H | L | N | E | A | W | S | I | D | S | E | M | A | F | I | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | E | E | E | V | M | S | F | L | E | R | L | V | A | H | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
|
| S | S |
|
| S | S |
|
| S |  |  |  |  |  |  |  |  |  |  | S |
| S | . | . | . | . | . | . | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|