Job Description P07395 Confidence 93.33% Date Thu Jan 5 11:00:19 GMT 2012 Rank 85 Aligned Residues 153 % Identity 13% Template c3qo8A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase, cytoplasmic; PDBTitle: crystal structure of seryl-trna synthetase from candida albicans Resolution 2.00 Å

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		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.					.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.				.	560	.	.	.
Predicted Secondary structure																																						.	.	.	.																																	.	.	.
Query SS confidence																																						.	.	.	.																																	.	.	.
Query Sequence		A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	H	P	.	.	.	.	G	V	E	A	L	L	L	P	S	P	I	S	V	E	M	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	.	.	.	N	Q	N	R	Q
Query Conservation																																						.	.	.	.																																	.	.	.
Alig confidence																																						.	.	.	.										.	.																						.	.	.
Template Conservation																																																			.	.
Template Sequence		N	Q	A	L	I	N	Y	G	L	S	F	L	S	S	K	G	Y	V	P	L	Q	A	P	V	M	M	N	K	E	V	M	A	K	T	A	Q	L	S	Q	F	D	E	E	L	Y	K	V	I	D	.	.	G	E	D	E	K	Y	L	I	A	T	S	E	Q	P	I	S	A	Y	H	A	G	E	W	F	E	S	P	A	E
Template Known Secondary structure															T	T	T								S								T	T	T	S								T							.	.	T	T							S	S	T						T	T	T	T	T				S	S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.								.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.
Query Sequence		Q	N	R	V	R	I	F	E	S	G	L	R	F	V	P	D	T	Q	A	.	.	.	.	.	.	.	P	L	G	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	T	G	K	L	N	E	V	E	F
Query Conservation																					.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.
Template Sequence		Q	L	P	V	R	Y	A	G	Y	S	S	C	F	R	R	E	A	G	S	H	G	K	D	A	W	G	I	F	R	V	H	A	F	E	K	I	E	Q	F	V	L	T	E	P	E	.	.	.	.	.	.	.	K	S	W	E	E	F	D	R	M	I	G	C	S	E	E	F	Y	Q	S	L	G	L	P	Y	R	V	V	G
Template Known Secondary structure																		T	T			S	T	T		S	S	S	S	S		S													G	G	.	.	.	.	.	.	.	G																			T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310								.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	E	A	N	P	A	L	H	P	G	Q	S	A	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	S	G	E	L	N	N	A	A	A	K	K	Y	D	L
Template Known Secondary structure				G	G	G			T	T		S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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