Job Description P07395 Confidence 99.68% Date Thu Jan 5 11:00:19 GMT 2012 Rank 33 Aligned Residues 213 % Identity 17% Template c3pcoC_ PDB info PDB header:ligase Chain: C: PDB Molecule:phenylalanyl-trna synthetase, alpha subunit; PDBTitle: crystal structure of e. coli phenylalanine-trna synthetase complexed2 with phenylalanine and amp Resolution 3.02 Å

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		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.		.	.	.	.	.	.	.	.					530	.	.	.	.	.
Predicted Secondary structure																																																															.									.	.	.	.
Query SS confidence																																																															.									.	.	.	.
Query Sequence		L	V	E	E	V	A	R	V	Y	G	Y	N	N	I	P	D	E	P	V	Q	A	S	L	I	M	G	T	H	R	E	A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	.	Q	M	I	H	P	G	V	E	.	.	.	.	A	L	L	L	P	S
Query Conservation																																																															.									.	.	.	.
Alig confidence																																																															.									.	.	.	.
Template Conservation
Template Sequence		E	S	A	A	L	N	A	R	L	A	A	E	T	I	D	V	S	L	P	G	R	R	I	E	N	G	G	L	H	P	V	T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F
Template Known Secondary structure													T				T	T	S			S																								T	T								S								T	T	T	T	T			S	S	S	T					T	T	B
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	S	V	E	M	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	Q	N	R	Q	Q	N	R	V	R	I	F	E	S	G	L	R	F	V	P	D	T	Q	A	P	L	G	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y
Query Conservation
Alig confidence								.																.	.	.	.																			.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																.	.	.	.																			.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	F	D	T	T	R	.	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	.	.	.	.	A	Q	Q	P	P	I	R	I	I	A	P	G	R	V	Y	R	N	D	.	Y	D	Q	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	.	.	.	.	.	.	.	.	.	.	.	T	N	I	S	F	T
Template Known Secondary structure		B	S	S	S	S		.				S		T	T								T	.	.	.	.	T			S	S											B	S		.		B	T	T	B		S												.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure								.																.	.	.	.																			.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.												.	.	.	.	220	.
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.		.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.					.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.				680	.	.	.	.	.	.	.
Predicted Secondary structure																			.																									.	.	.	.																								.	.	.
Query SS confidence																			.																									.	.	.	.																								.	.	.
Query Sequence		D	L	K	G	D	L	E	S	V	L	D	L	T	G	K	L	N	.	E	V	E	F	R	A	E	A	N	P	A	L	H	P	G	Q	S	A	A	I	Y	L	K	G	.	.	.	.	E	R	I	G	F	V	G	V	V	H	P	E	L	E	R	K	L	D	L	N	G	R	T	.	.	.	L	V	F	E	L	E	W	N
Query Conservation																			.																									.	.	.	.																								.	.	.
Alig confidence																			.																									.	.	.	.						.																		.	.	.
Template Conservation																																																					.
Template Sequence		N	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	T	E	P	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	.	G	M	V	H	P	N	V	L	R	N	V	G	I	D	P	E	V	Y	S	G	F	A	F	G	M	G	M	E
Template Known Secondary structure															S	S	S												T	T									B			S	S	S	S		B						.										T	T	T			T	T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		688	.	690	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	T	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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