Job Description P07395 Confidence 93.36% Date Thu Jan 5 11:00:19 GMT 2012 Rank 84 Aligned Residues 155 % Identity 13% Template c3lssA_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp Resolution 1.95 Å

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		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.					.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		E	A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	H	P	.	.	.	.	G	V	E	A	L	L	L	P	S	P	I	S	V	E	M	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	Q	N	R	Q	Q	N
Query Conservation																																							.	.	.	.
Alig confidence																																							.	.	.	.											.	.
Template Conservation																																																					.	.
Template Sequence		L	Q	V	A	L	V	S	Y	S	L	D	F	L	V	K	R	G	Y	T	P	F	Y	P	P	F	F	L	N	R	D	V	M	G	E	V	A	Q	L	S	Q	F	D	E	E	L	Y	Q	V	S	G	D	.	.	G	D	K	K	Y	L	I	A	T	S	E	M	P	I	A	A	Y	H	R	G	R	W	F	T	E	L	K
Template Known Secondary structure																T	T	T								S											S								T						S	S	.	.	S	S						S	S	T								T	T	T				S			S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
			566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.								.	.	.	.	.	590	.	.	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure		.																				.	.	.	.	.	.	.													.
Query SS confidence		.																				.	.	.	.	.	.	.													.
Query Sequence		.	R	V	R	I	F	E	S	G	L	R	F	V	P	D	T	Q	A	P	L	.	.	.	.	.	.	.	G	I	R	Q	D	L	M	L	A	G	V	I	.	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	T	G	K	L	N	E	V	E	F
Query Conservation		.																				.	.	.	.	.	.	.													.
Alig confidence		.																				.	.	.	.	.	.	.													.											.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		E	P	L	K	Y	A	G	M	S	T	C	F	R	K	E	A	G	A	H	G	R	D	T	L	G	I	F	R	V	H	Q	F	D	K	I	E	Q	F	V	V	C	S	P	R	Q	E	E	S	W	R	.	.	.	.	.	.	H	L	E	D	M	I	T	T	S	E	E	F	N	K	S	L	G	L	P	Y	R	V	V	N
Template Known Secondary structure		S															T	T		S	S	S			S	T	T	S	S		S													S	S	T	T					.	.	.	.	.	.																	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.							.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	E	A	N	P	A	L	H	P	G	Q	S	A	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C	S	G	A	L	N	N	A	A	A	K	K	Y	D	L
Template Known Secondary structure				T	T	T			S	S		S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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