Job Description P07395 Confidence 22.59% Date Thu Jan 5 11:00:19 GMT 2012 Rank 134 Aligned Residues 66 % Identity 23% Template c3iz5s_ PDB info PDB header:ribosome Chain: S: PDB Molecule:60s ribosomal protein l18a (l18ae); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.
Predicted Secondary structure																																						.																																		.	.	.
Query SS confidence																																						.																																		.	.	.
Query Sequence		A	T	I	G	A	V	L	P	G	D	F	K	I	K	A	A	K	L	R	G	E	P	S	E	G	M	L	C	S	F	S	E	L	G	I	S	.	D	D	H	S	G	I	I	E	L	P	A	D	A	P	I	G	T	D	I	R	E	Y	L	K	L	D	D	N	T	I	E	I	S	.	.	.	V	T	P	N	R	A	D
Query Conservation																																						.																																		.	.	.
Alig confidence																					.	.																.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																					.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	V	G	L	V	A	P	V	D	V	V	V	P	P	G	N	T	G	.	.	L	D	P	S	Q	T	S	F	F	Q	V	L	N	I	P	T	K	I	N	K	G	T	V	E	I	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	E	L	I	K	K	G	D	K	V	G	S	S	E	S	A
Template Known Secondary structure				T	T		B		S	S											.	.			S	S		T							T							T	T						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S	B
Template Predicted Secondary structure																					.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		169	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	G	I	I	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A	K	L	G	I
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions