Job Description P07395 Confidence 74.04% Date Thu Jan 5 11:00:19 GMT 2012 Rank 102 Aligned Residues 180 % Identity 9% Template c3ialB_ PDB info PDB header:ligase Chain: B: PDB Molecule:prolyl-trna synthetase; PDBTitle: giardia lamblia prolyl-trna synthetase in complex with prolyl-2 adenylate Resolution 2.20 Å

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		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.						.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.				.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure																																				.	.	.	.	.																			.	.	.
Query SS confidence																																				.	.	.	.	.																			.	.	.
Query Sequence		A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	.	.	.	.	.	H	P	G	V	E	A	L	L	L	P	S	P	I	S	V	E	M	S	.	.	.	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	Q	N	R
Query Conservation																																				.	.	.	.	.																			.	.	.
Alig confidence																																				.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		E	N	A	I	M	R	L	C	E	E	E	Y	A	K	V	G	I	S	Q	I	L	F	P	T	V	I	P	E	S	F	L	K	K	E	S	D	H	I	K	G	F	E	A	E	C	F	W	V	E	K	G	G	L	Q	P	L	E	E	R	L	A	L	R	P	T	S	E	T	A	I	Y	S	M	F	S	K	W	V	R	S
Template Known Secondary structure																T	T								S								T	S	S								G	G	G								T	T											S	S	S													S	B
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		563	.	.		.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.				.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.		.	.	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure					.																					.	.	.																																									.
Query SS confidence					.																					.	.	.																																									.
Query Sequence		Q	Q	N	.	R	V	R	I	F	E	S	G	L	R	F	V	P	D	T	Q	A	P	L	G	.	.	.	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	.	D	L	T	G	K	L	N	E	V	E	F	R
Query Conservation					.																					.	.	.																																									.
Alig confidence					.																					.	.	.																						.	.	.	.	.	.														.
Template Conservation																																																		.	.	.	.	.	.
Template Sequence		Y	K	D	L	P	L	K	I	H	Q	T	C	T	I	F	R	H	E	T	K	N	T	K	P	L	I	R	V	R	E	I	H	W	N	E	A	H	C	C	H	A	T	A	E	D	A	V	S	.	.	.	.	.	.	Q	L	S	D	Y	W	K	V	I	D	T	I	F	S	D	E	L	C	F	K	G	Q	K	L	R	R
Template Known Secondary structure		G	G	G														T	T			S		B	T	T	T	B		S												S	S							.	.	.	.	.	.														T	T	T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.						.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		A	E	A	N	P	A	L	H	P	G	Q	S	A	A	I	Y	L	.	.	.	.	.	K	G	E	R	I	G	F	V	G	V	V	H	P	E	L	E	R	K	L	D	L	N
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.
Template Conservation
Template Sequence		V	C	W	D	R	F	P	G	A	D	Y	S	E	V	S	D	V	V	M	P	C	G	R	V	L	Q	T	A	G	I	H	N	L	G	Q	R	F	S	S	T	F	D	I	L
Template Known Secondary structure			G	G	G			T	T		S										T	T	S													T						T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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