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Job DescriptionP07395
Confidence74.04%DateThu Jan 5 11:00:19 GMT 2012
Rank102Aligned Residues180
% Identity9%Templatec3ialB_
PDB info PDB header:ligaseChain: B: PDB Molecule:prolyl-trna synthetase; PDBTitle: giardia lamblia prolyl-trna synthetase in complex with prolyl-2 adenylate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   491........500.........510.........520.... .....530.........540.. .......550.........560..
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Query Sequence  ADLSLKRVKTLLNDKGYQEVITYSFVDPKVQQMI. . . . . HPGVEALLLPSPISVEMS. . . AMRLSLWTGLLATVVYNQNR
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Template Sequence  ENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEAECFWVEKGGLQPLEERLALRPTSETAIYSMFSKWVRS
Template Known Secondary structure  TT




STSSGGG

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SB
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
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Query Sequence  QQN. RVRIFESGLRFVPDTQAPLG. . . IRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESVL. DLTGKLNEVEFR
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Template Sequence  YKDLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCHATAEDAVS. . . . . . QLSDYWKVIDTIFSDELCFKGQKLRR
Template Known Secondary structure  GGG


TT

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BTTTB
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   162.......170.........180.........190.........200......... 210.........220.........230.....
 
   638.640.........650.... .....660.........670......
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Query Sequence  AEANPALHPGQSAAIYL. . . . . KGERIGFVGVVHPELERKLDLN
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Template Sequence  VCWDRFPGADYSEVSDVVMPCGRVLQTAGIHNLGQRFSSTFDIL
Template Known Secondary structure 
GGG

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   236...240.........250.........260.........270.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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