Job Description P07395 Confidence 100.00% Date Thu Jan 5 11:00:19 GMT 2012 Rank 11 Aligned Residues 128 % Identity 41% Template c3bu2B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:putative trna-binding protein; PDBTitle: crystal structure of a trna-binding protein from2 staphylococcus saprophyticus subsp. saprophyticus.3 northeast structural genomics consortium target syr77 Resolution 2.70 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	A	L	A	N	Q	I	T	M	A	G	L	E	V	D	G	V	E	P	V	A	G	S	F	H	G	V	V	V	G	E	V	V	E	C	A	Q	H	P	N	A	D	K	L	R	V	T	K	V	N	V	G	G	D	R	L	L	D	I	V	C	G	A	P	N	C	R	Q	G	L	R	V	A	V	A	T	I	G	A
Query Conservation
Alig confidence																								.	.	.																														.
Template Conservation																								.	.	.																														.
Template Sequence		V	Q	A	F	Q	K	A	I	E	A	A	G	F	T	Y	K	L	D	A	D	F	T	.	.	.	P	K	F	V	V	G	Y	V	E	T	K	D	K	H	P	D	A	D	K	L	S	V	L	S	V	D	V	A	T	.	E	K	L	Q	I	V	C	G	A	P	N	V	E	A	G	Q	K	V	V	V	A	K	V	G	A
Template Known Secondary structure												T	T										S	.	.	.		S													T	T	T	S	S									S	S	.										T	T			T	T								T	T
Template Predicted Secondary structure																								.	.	.																														.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		V	L	P	G	D	F	K	I	K	A	A	K	L	R	G	E	P	S	E	G	M	L	C	S	F	S	E	L	G	I	S	D	.	.	D	H	S	G	I	I	E	L	P	A	D	A	P	I	G	T	D	I	R	E
Query Conservation																																		.	.
Alig confidence																																		.	.
Template Conservation
Template Sequence		V	X	P	S	G	X	V	I	K	D	A	E	L	R	G	V	A	S	S	G	X	I	C	S	X	K	E	L	G	L	P	N	A	P	Q	E	K	G	I	X	V	L	S	D	D	Y	T	V	G	Q	S	F	F	E
Template Known Secondary structure		B		T	T	S		B							T	T					S					T	T	T	T	T		S	S			S			S						T	T	S		T	T	S	B	S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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