Job Description P07395 Confidence 99.48% Date Thu Jan 5 11:00:19 GMT 2012 Rank 34 Aligned Residues 191 % Identity 10% Template c2zimA_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyrrolysyl-trna synthetase; PDBTitle: pyrrolysyl-trna synthetase bound to adenylated pyrrolysine and2 pyrophosphate Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	M	G	T	H	R	E	A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	H	P	G	V	E	A	L	L	L	P	S	P	I	S	V	E	M	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	Q	N	R
Query Conservation
Alig confidence																																																								.	.
Template Conservation																																																								.	.
Template Sequence		Y	A	E	E	R	E	N	Y	L	G	K	L	E	R	E	I	T	R	F	F	V	D	R	G	F	L	E	I	K	S	P	I	L	I	P	L	E	Y	I	E	R	M	G	I	D	E	L	S	K	Q	I	F	R	V	.	.	D	K	N	F	C	L	R	P	M	L	A	P	N	L	Y	N	Y	L	R	K	L	D	R	A
Template Known Secondary structure				T	T																			T	T								S				T						T	T					G	G	G					.	.	T	T	T					S		S												T	T	T
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		563	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	N	R	V	R	I	F	E	S	G	L	R	F	V	P	D	T	Q	A	P	L	G	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	T	G	K	L	N	E	V	E	F	R	A	E	A	N	P
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		L	P	D	P	I	K	I	F	E	I	G	P	C	Y	R	K	E	S	D	G	K	E	H	L	E	E	F	T	M	L	N	F	C	Q	M	G	.	.	.	.	.	.	.	.	.	.	.	S	G	C	T	R	E	N	L	E	S	I	I	T	D	F	L	N	H	L	G	I	.	D	F	K	I	V	G	D	S	C	M	V
Template Known Secondary structure		S		S	S														S			S	S			S											S	.	.	.	.	.	.	.	.	.	.	.	T	T																		T		.										T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.												.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	H	P	G	Q	S	A	A	I	Y	L	K	G	E	R	I	G	F	V	G	V	V	H	P	E	L	E	R	K	L	D	L	N	G	R	T	L	V	F	E	L	E	W	N	K	L	A
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		Y	G	D	T	.	.	.	L	D	V	M	H	G	D	L	E	L	S	S	A	V	V	G	P	I	P	L	D	R	E	W	G	I	D	K	P	W	I	G	A	G	F	G	L	E	R	L	L
Template Known Secondary structure		T				.	.	.						T	T									S			G	G	G	G	G	G	T			S
Template Predicted Secondary structure						.	.	.
Template SS confidence
		384	.	.	.				.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions