Job Description P07395 Confidence 100.00% Date Thu Jan 5 11:00:19 GMT 2012 Rank 12 Aligned Residues 236 % Identity 17% Template c2rhqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phenylalanyl-trna synthetase alpha chain; PDBTitle: phers from staphylococcus haemolyticus- rational protein2 engineering and inhibitor studies Resolution 2.20 Å

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		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.				530	.	.	.	.	.	.
Predicted Secondary structure																																																														.										.	.	.
Query SS confidence																																																														.										.	.	.
Query Sequence		L	V	E	E	V	A	R	V	Y	G	Y	N	N	I	P	D	E	P	V	Q	A	S	L	I	M	G	T	H	R	E	A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	.	Q	Q	M	I	H	P	G	V	E	.	.	.	A	L	L	L	P	S	P
Query Conservation																																																														.										.	.	.
Alig confidence																																																														.										.	.	.
Template Conservation
Template Sequence		L	M	E	K	L	N	Q	Q	L	A	E	E	T	I	D	V	T	L	P	S	R	Q	I	S	I	G	S	K	H	P	L	T	R	T	V	E	E	I	E	D	L	F	L	G	L	G	Y	E	I	V	D	G	Y	E	V	E	Q	D	Y	Y	N	F	E	A	L	N	L	P	K	S	H	P	A	R	D	M	Q	D	S	F
Template Known Secondary structure			T	T						T	T	T	T				T	T	S																										T	T	T								S								T	G	G	G	T			T	T		G	G	G		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	V	E	M	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	Q	N	R	Q	Q	N	R	V	R	I	F	E	S	G	L	R	F	V	P	D	T	Q	A	P	L	G	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D
Query Conservation
Alig confidence																													.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	I	T	D	E	I	L	M	R	T	H	T	S	P	V	Q	A	R	T	M	E	K	R	N	G	Q	G	.	.	P	V	K	I	I	C	P	G	K	V	Y	R	R	D	S	D	D	A	T	H	S	H	Q	F	T	Q	I	E	G	L	V	V	D	.	.	.	.	.	.	.	.	.	.	.	K	N	I	K	M	S	D
Template Known Secondary structure		B	S	S	S	S					S	S	S											T	T	T		S	.	.																	B	T	T	B		S												.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																													.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.												.	.	.	.	.	.	.
		617	.	.	620	.	.	.	.	.	.	.	.	.	630		.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.															.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.				.	.	.
Predicted Secondary structure																.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence																.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		L	K	G	D	L	E	S	V	L	D	L	T	G	K	.	L	N	E	V	E	F	R	A	E	A	N	P	A	L	H	P	G	Q	S	A	A	I	Y	L	K	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	G	F	V	G	V	V	H	P	E	L	E	R	K	L	D	L	.	.	.	N	G	R
Query Conservation																.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence																.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		L	K	G	T	L	E	L	V	A	K	K	L	F	G	A	D	R	E	I	R	L	R	P	S	Y	F	P	F	T	E	P	S	V	E	V	D	V	S	C	F	K	C	K	G	K	G	C	N	V	C	K	H	T	G	W	I	E	I	L	G	A	G	M	V	H	P	N	V	L	E	M	A	G	F	D	S	N	E	Y	S
Template Known Secondary structure																T	T										B	T	T												S	S	S	T	T	S			T	T	T	T	T	S	S																	T	T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		679	680	.	.	.	.	.	.	.	.	.	690	.			.	.	.	.	.	.	.	.	700									.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.										.	.	.	.	.	.	.	.
Query SS confidence															.	.										.	.	.	.	.	.	.	.
Query Sequence		T	L	V	F	E	L	E	W	N	K	L	A	D	.	.	R	V	V	P	Q	A	R	E	I	.	.	.	.	.	.	.	.	S	R	F	P	A	N	R	R	D
Query Conservation															.	.										.	.	.	.	.	.	.	.
Alig confidence															.	.										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	A	F	G	M	G	P	D	R	I	A	M	L	K	Y	G	I	E	D	I	R	Y	F	Y	T	N	D	V	R	F	L	E	Q	F	K	A	V	E	D	R
Template Known Secondary structure																		T				T	T											T	T			S
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions