Job Description P07395 Confidence 46.98% Date Thu Jan 5 11:00:19 GMT 2012 Rank 106 Aligned Residues 101 % Identity 17% Template c2pmfA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glycyl-trna synthetase; PDBTitle: the crystal structure of a human glycyl-trna synthetase mutant Resolution 2.85 Å

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		491	.	.	.	.	.	.	.	.	500	.	.		.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure														.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	L	S	L	K	R	V	K	T	L	L	.	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	H	P	G	V	E	A	L	L	L	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	N	I	I	Q	T	W	R	Q	H	F	I	Q	E	E	Q	I	L	E	I	D	C	T	M	L	T	P	E	P	V	L	K	T	S	G	H	V	D	K	F	A	D	F	M	V	K	D	V	K	N	G	E	C	F	R	A	D	H	L	L	K	A	H	L	Q	K	L	M	S	D	K	K	C	S	V	E	K	K	S
Template Known Secondary structure													T					T								S									T	T		T	T	T	S								B	T	T	T																			S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
																																																				536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.			.	.	.	560	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	S	V	E	M	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	.	.	V	Y	N	Q	N	R	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		E	M	E	S	V	L	A	Q	L	D	N	Y	G	Q	Q	E	L	A	D	L	F	V	N	Y	N	V	K	S	P	I	T	G	N	D	L	S	P	P	V	S	F	N	L	M	F	K	T	F	I	G	P	G	G	N	M	P	G	Y	L	R	P	E	T	A	Q	G	I	F	L	N	F	K	R	L	L	E	F	N	Q	G
Template Known Secondary structure								T	T	G	G	G													T	T				S	S	S				B									S						S	S	S	S	S	S						S		S						T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.				580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		Q	N	R	V	R	I	F	E	S	G	L	R	F	V	P	D	.	.	.	T	Q	A	P	L	G	I	R	Q	D	L	M
Query Conservation																		.	.	.
Alig confidence																		.	.	.
Template Conservation
Template Sequence		K	L	P	F	A	A	A	Q	I	G	N	S	F	R	N	E	I	S	P	R	S	G	L	I	R	V	R	E	F	T	M
Template Known Secondary structure			S															S	S			S	T	T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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